miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00452;mir-172;CR954190.2/85410-85533 3880:Medicago truncatula
(barrel medic)
Length = 124
Score = 224 bits (113), Expect = 2e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1 gccggtggagcatcatcaggattcacaagattttgaagggtttaatttgttttgattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 gccggtggagcatcatcaggattcacaagattttgaagggtttaatttgttttgattgtt 66
Query: 61 tcaaatagattagccctttgacatatgagaatcctgatgatgctgcagctgca 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tcaaatagattagccctttgacatatgagaatcctgatgatgctgcagctgca 119
>RF00452;mir-172;EU549227.1/243-121 3702:Arabidopsis thaliana (thale
cress)
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 84 tatgagaatcctgatgatgctgcagctgca 113
|||||||||| |||||||||||||||||||
Sbjct: 89 tatgagaatcttgatgatgctgcagctgca 118
>RF00452;mir-172;BABK01012763.1/1927-2053 34305:Lotus japonicus
Length = 127
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 ggtggagcatcatcaggattcacaag 29
||||||||||||||| ||||||||||
Sbjct: 10 ggtggagcatcatcaagattcacaag 35
>RF00452;mir-172;ABXC01003290.1/30664-30525 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tgagaatcctgatgatgctgca 107
||||||||||||||||||||||
Sbjct: 108 tgagaatcctgatgatgctgca 129
