miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;ABIM01002081.1/1084-952 3649:Carica papaya (papaya)
Length = 133
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 acttgccaaaggagagctgccctgtga 96
|||||||||||||||||||||||||||
Sbjct: 100 acttgccaaaggagagctgccctgtga 126
>RF00445;mir-399;AASG02006945.1/8927-9041 3988:Ricinus communis
(castor bean)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 71 cttgccaaaggagagctgccctgtga 96
||||||||||||||||||||||||||
Sbjct: 83 cttgccaaaggagagctgccctgtga 108
>RF00445;mir-399;DQ063659.1/70-185 3702:Arabidopsis thaliana (thale
cress)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tcacttgccaaaggagagctgccctgt 94
|||||||||||||||||| ||||||||
Sbjct: 80 tcacttgccaaaggagagttgccctgt 106
>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 acttgccaaaggagagctgccctgtg 95
|||||||||||||||| |||||||||
Sbjct: 70 acttgccaaaggagagttgccctgtg 95