miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00695;MIR398;ABXC01000980.1/272433-272305 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 216 bits (109), Expect = 4e-56
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 gggggcggactgggaacacatgggaatgagagatgagattgctcggtcgtgctggccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gggggcggactgggaacacatgggaatgagagatgagattgctcggtcgtgctggccctg 71
Query: 61 ggctcgtagttgatctgcttgtatgcatgtgttctcaggtcgcccccgc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ggctcgtagttgatctgcttgtatgcatgtgttctcaggtcgcccccgc 120
>RF00695;MIR398;EU940707.1/90-217 4577:Zea mays
Length = 128
Score = 69.9 bits (35), Expect = 6e-12
Identities = 55/60 (91%), Gaps = 5/60 (8%)
Strand = Plus / Plus
Query: 1 gggggcggactgggaacacatgggaatgagagatgag---attgctcggtcgtgctggcc 57
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 12 gggggcggactgggaacacatgggaat--gagatgagatcattgctcggtcgtgctggcc 69
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 tgcatgtgttctcaggtcgcccccg 108
|||||||||||||||||||||||||
Sbjct: 94 tgcatgtgttctcaggtcgcccccg 118
