miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00842;MIR403;ABIM01005602.1/13538-13393 3649:Carica papaya
           (papaya)
          Length = 146

 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 51  tgctagattcacgcacaaactcg 73
           |||||||||||||||||||||||
Sbjct: 114 tgctagattcacgcacaaactcg 136




>RF00842;MIR403;CAAP02000014.1/37272-37187 29760:Vitis vinifera
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 1  gtttgtgcgtgaatctaacaacccttt 27
          |||||||||||||||||||| ||||||
Sbjct: 73 gtttgtgcgtgaatctaacaccccttt 47




>RF00842;MIR403;CAAP02002017.1/13776-13691 29760:Vitis vinifera
          Length = 86

 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 1  gtttgtgcgtgaatctaacaacccttt 27
          |||||||||||||||||||| ||||||
Sbjct: 73 gtttgtgcgtgaatctaacaccccttt 47