miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00842;MIR403;AARH01004350.1/142675-142577 3694:Populus
trichocarpa
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 cgttagattcacgcacaaactcg 125
|||||||||||||||||||||||
Sbjct: 67 cgttagattcacgcacaaactcg 89
>RF00842;MIR403;AM431810.2/2208-2094 29760:Vitis vinifera
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 cgttagattcacgcacaaactcg 125
|||||||||||||||||||||||
Sbjct: 83 cgttagattcacgcacaaactcg 105
>RF00842;MIR403;AASG02004953.1/3036-2929 3988:Ricinus communis
(castor bean)
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gttagattcacgcacaaactcg 125
||||||||||||||||||||||
Sbjct: 77 gttagattcacgcacaaactcg 98
>RF00842;MIR403;AASG02008767.1/6368-6472 3988:Ricinus communis
(castor bean)
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gttagattcacgcacaaactcg 125
||||||||||||||||||||||
Sbjct: 74 gttagattcacgcacaaactcg 95
>RF00842;MIR403;CAAP02000014.1/37272-37187 29760:Vitis vinifera
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gttagattcacgcacaaactcg 125
||||||||||||||||||||||
Sbjct: 55 gttagattcacgcacaaactcg 76
>RF00842;MIR403;CAAP02002017.1/13776-13691 29760:Vitis vinifera
Length = 86
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 gttagattcacgcacaaactcg 125
||||||||||||||||||||||
Sbjct: 55 gttagattcacgcacaaactcg 76
