miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;EU949059.1/171-61 4577:Zea mays
Length = 111
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 atgccaaaggagagctgccctg 66
||||||||||||||||||||||
Sbjct: 80 atgccaaaggagagctgccctg 101
>RF00445;mir-399;ABIM01002081.1/1084-952 3649:Carica papaya (papaya)
Length = 133
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 tgccaaaggagagctgccctg 66
|||||||||||||||||||||
Sbjct: 103 tgccaaaggagagctgccctg 123
>RF00445;mir-399;AASG02006945.1/8927-9041 3988:Ricinus communis
(castor bean)
Length = 115
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 tgccaaaggagagctgccctg 66
|||||||||||||||||||||
Sbjct: 85 tgccaaaggagagctgccctg 105
>RF00445;mir-399;ABXC01002521.1/23780-23678 4558:Sorghum bicolor
(sorghum)
Length = 103
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 tgccaaaggagagctgccctg 66
|||||||||||||||||||||
Sbjct: 73 tgccaaaggagagctgccctg 93
>RF00445;mir-399;AP008208.1/7649784-7649899 39947:Oryza sativa
Japonica Group
Length = 116
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 tgccaaaggagagctgccctg 66
|||||||||||||||||||||
Sbjct: 86 tgccaaaggagagctgccctg 106
