miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;ABIM01011291.1/8261-8180 3649:Carica papaya
(papaya)
Length = 82
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gacagaagagagtgagcacaggccggcaactgtat 35
|||||||||||||||||||| || ||||| |||||
Sbjct: 3 gacagaagagagtgagcacacgcaggcaattgtat 37
>RF00073;mir-156;AASG02015394.1/3647-3565 3988:Ricinus communis
(castor bean)
Length = 83
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gacagaagagagtgagcacaggccggcaactgtat 35
|||||||||||||||||||| || ||||| |||||
Sbjct: 3 gacagaagagagtgagcacacgcaggcaattgtat 37
>RF00073;mir-156;AACV01011046.1/23142-23062 39947:Oryza sativa
Japonica Group
Length = 81
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgtgctcacttctctttctgtc 88
||||||||||||||||||||||
Sbjct: 58 tgtgctcacttctctttctgtc 79
>RF00073;mir-156;AY551212.1/74-153 4530:Oryza sativa (rice)
Length = 80
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tgtgctcacttctctttctgtc 88
||||||||||||||||||||||
Sbjct: 57 tgtgctcacttctctttctgtc 78