miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;DQ063659.1/70-185 3702:Arabidopsis thaliana (thale
           cress)
          Length = 116

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  acttgccaaaggagagttgccct 102
           |||||||||||||||||||||||
Sbjct: 82  acttgccaaaggagagttgccct 104




>RF00445;mir-399;BABK01105304.1/403-505 34305:Lotus japonicus
          Length = 103

 Score = 46.1 bits (23), Expect = 9e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 80  acttgccaaaggagagttgccct 102
           |||||||||||||||||||||||
Sbjct: 70  acttgccaaaggagagttgccct 92




>RF00445;mir-399;AC155803.26/43739-43832 3880:Medicago truncatula
           (barrel medic)
          Length = 94

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 81  cttgccaaaggagagttgccct 102
           ||||||||||||||||||||||
Sbjct: 62  cttgccaaaggagagttgccct 83




>RF00445;mir-399;AP007308.2/25934-26026 34305:Lotus japonicus
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 81  cttgccaaaggagagttgccct 102
           ||||||||||||||||||||||
Sbjct: 61  cttgccaaaggagagttgccct 82