miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;CAAP02001413.1/59408-59313 29760:Vitis vinifera
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 77  tcgccggcaattcatccttggctt 100
           ||||||||||||||||||||||||
Sbjct: 35  tcgccggcaattcatccttggctt 12




>RF00645;MIR169_2;BABK01035994.1/667-569 34305:Lotus japonicus
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 79  gccggcaattcatccttggcttcatt 104
           |||||||| |||||||||||||||||
Sbjct: 33  gccggcaagtcatccttggcttcatt 8




>RF00645;MIR169_2;AP005093.3/64123-64017 39947:Oryza sativa
          Japonica Group
          Length = 107

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 78 cgccggcaattcatccttggct 99
          ||||||||||||||||||||||
Sbjct: 34 cgccggcaattcatccttggct 13