miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01960;SSU_rRNA_eukarya;AAYZ01438197.1/1-1685 9978:Ochotona
princeps (American pika)
Length = 1685
Score = 46.1 bits (23), Expect = 7e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 9 gaagagagagttcaagagtacgtgaaaccgttcaggggtaaac 51
|||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 58 gaagagagagttcaagagggcgtgaacccgttaagaggtaaac 16
>RF01960;SSU_rRNA_eukarya;AY988505.1/1-1521 109957:Physocladia obscura
Length = 1521
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agaactttgaagagagagttcaagagtacgtgaaa 35
||||||||||| |||||||| || |||||||||||
Sbjct: 1140 agaactttgaaaagagagttaaatagtacgtgaaa 1174
>RF01960;SSU_rRNA_eukarya;AY988503.1/1-1511 109932:Entophlyctis
luteolus
Length = 1511
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agaactttgaagagagagttcaagagtacgtgaaa 35
||||||||||| |||||||| || |||||||||||
Sbjct: 1141 agaactttgaaaagagagttaaacagtacgtgaaa 1175
>RF01960;SSU_rRNA_eukarya;AY988500.1/1-1510 109870:Asterophlyctis
sarcoptoides
Length = 1510
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agaactttgaagagagagttcaagagtacgtgaaa 35
||||||||||| |||||||| || |||||||||||
Sbjct: 1136 agaactttgaaaagagagttaaacagtacgtgaaa 1170
>RF01960;SSU_rRNA_eukarya;AY988504.1/1-1569 110081:Obelidium
mucronatum
Length = 1569
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agaactttgaagagagagttcaagagtacgtgaaa 35
||||||||||| |||||||| || |||||||||||
Sbjct: 1134 agaactttgaaaagagagttaaatagtacgtgaaa 1168
>RF01960;SSU_rRNA_eukarya;AY988502.1/1-1541 109890:Chytriomyces
spinosus
Length = 1541
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agaactttgaagagagagttcaagagtacgtgaaa 35
||||||||||| |||||||| || |||||||||||
Sbjct: 1131 agaactttgaaaagagagttaaatagtacgtgaaa 1165
