miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
           Indica Group
          Length = 122

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 152 ttaaattgggacggagggagtac 174
           |||||||||||||||||||||||
Sbjct: 97  ttaaattgggacggagggagtac 119




>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
           Group
          Length = 241

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 149 catttaaattgggacggagggagtac 174
           |||||||| |||||||||||||||||
Sbjct: 26  catttaaaatgggacggagggagtac 1




>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
           Group
          Length = 240

 Score = 44.1 bits (22), Expect = 7e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 ttaaattgggacggagggagta 173
           ||||||||||||||||||||||
Sbjct: 218 ttaaattgggacggagggagta 239