miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 113 bits (57), Expect = 7e-25
Identities = 78/84 (92%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatatgtatatata--t 66
|||| |||||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 3 gctattccctccgtttcataatataagactttctagcattgcccacatctatatatatgt 62
Query: 67 gtctagattcattaacatctatat 90
|| |||||||||||||||||||||
Sbjct: 63 gtttagattcattaacatctatat 86
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||||| ||||||||| | |||||||||||||||| ||||||||| || |||||| ||||
Sbjct: 136 gctactacctccgttttacaatataagactttctaacattgcccacatatatatagatgt 77
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 111 bits (56), Expect = 3e-24
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||||||| |||| | |||||||||| || |||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatatatatgtct 64
Query: 71 agattcattaacatctatatgaat 94
||||||||||||||||||||||||
Sbjct: 65 agattcattaacatctatatgaat 88
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||||||||||||||||| |||||||||||||||||||||||| || | || | |||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcacatgtgtgtt 63
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaat 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| |||| |||||||| ||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgccca 90
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||| ||||||||| |||||||||||||||||| ||| || ||||| ||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgtct 64
Query: 71 agattcattaacatctatatgaat 94
||||||||||||||||||||||||
Sbjct: 65 agattcattaacatctatatgaat 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
||||||||| |||||||||| ||||||||||||||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattg 94
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||||||||| ||| ||||||||||
Sbjct: 57 tatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||||||||||| ||||||||||||||| ||| |||| || ||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatgtct 64
Query: 71 agattcattaacatctatatgaat 94
|||||||||||||| |||||||||
Sbjct: 65 agattcattaacatatatatgaat 88
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||||| | ||||||||||||||||||| |||| || ||||||||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgt 75
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||| ||||||||||||||| |||| | |||||||||| |||||||| ||||| | |||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattacccatatgcatatagacgtc 63
Query: 70 tagattcattaacatctatatg 91
||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatg 85
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| || |||||||||||| || | |||||||||| ||||||||||||||
Sbjct: 57 tatatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
||||||||| |||||||||| ||| | ||||||||||||||| ||| ||||| ||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgt 75
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 82/94 (87%), Gaps = 8/94 (8%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatg--- 67
|||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 68 -----tctagattcattaacatctatatgaatat 96
|||||||||||||||||||||||||||||
Sbjct: 80 atgaatctagattcattaacatctatatgaatat 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/145 (80%), Gaps = 16/145 (11%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatg-- 67
||||| |||| ||||||||||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 4 ctacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtt 63
Query: 68 ------tctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgt 121
||||||||||||| |||||||||||||| |||||||||||| || ||
Sbjct: 64 aatgaatctagattcattagcatctatatgaata--------tgggtaatgctagaaagt 115
Query: 122 cttacattataaaacggaggaagta 146
|||| ||||| ||||||||| ||||
Sbjct: 116 cttatattatgaaacggagggagta 140
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa
Indica Group
Length = 141
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%), Gaps = 5/85 (5%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgcccatatgtatata-----tatgtcta 71
|||||||||||||| |||||||||||||||||||||| || |||||| ||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccacatttatatagatgttatgtcta 70
Query: 72 gattcattaacatctatatgaatat 96
||||||||||||||||||| |||||
Sbjct: 71 gattcattaacatctatataaatat 95
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
||||| |||||||||||||| |||||||||||||||||| |||||| |||||| ||||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgt 80
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||| |||||||| ||||||| || |||||||||||| |||||||| |||||
Sbjct: 57 tatataaatgtgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa
Japonica Group
Length = 136
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||||||||||||||||| |||||||||||||||||||||||| || | | | |||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcacgtgtgtgtt 63
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 64 tagattcattaacatctatatgaat 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| |||| |||||||| ||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgccca 90
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 115/138 (83%), Gaps = 10/138 (7%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg--cccatatgtatatatatgt 68
|||||||||||||||||| | |||||||||||||||||| | ||| |||| ||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagatatgt 64
Query: 69 ctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtcttacat 128
||||||| ||||||||| |||||||||||||| ||||||| || |||||||||
Sbjct: 65 ctagatttattaacatc--------tatatgaatgtgggcaatgctagaaagtcttacat 116
Query: 129 tataaaacggaggaagta 146
| | ||||||||||||||
Sbjct: 117 tgtgaaacggaggaagta 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgccca 92
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggtaatgctataaagtcttacattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||||||||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgccca 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| ||||||||| ||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattaccca 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 65 atgtctagattcattaacatctatatgaat 94
|||||||||||||||| |||||||||||||
Sbjct: 85 atgtctagattcattagcatctatatgaat 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| |||| || || |||||||||| | ||||||||| ||||
Sbjct: 106 tatatgaatgtgggcaatgttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 87.7 bits (44), Expect = 4e-17
Identities = 111/136 (81%), Gaps = 18/136 (13%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcattgc----------ttatatgtct 73
Query: 71 agattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtcttacatta 130
||||||||||||||| |||||||||||||| ||||||| || | |||||||||
Sbjct: 72 agattcattaacatc--------tatatgaatgtgggcaatgctagaaagacttacatta 21
Query: 131 taaaacggaggaagta 146
| ||||||||||||||
Sbjct: 20 tgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgccca 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 109 aatgctataacgtcttacattataaaacggaggaagta 146
||||||| || |||||||||||| ||||||||| ||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagggagta 122
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatat 50
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||| ||||||||||||||||||||||||||||||||
Sbjct: 78 tatacatatgtctagattcattaacatctatatgaat 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 62 tatatgtctagattcattaacatctatatgaatat 96
||||| ||||| |||||||||||||||||||||||
Sbjct: 81 tatatatctaggttcattaacatctatatgaatat 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||| ||| ||||||||| ||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattg 120
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatat 113
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||| ||||||||||||||||||||||||||||||||
Sbjct: 85 tatacatatgtctagattcattaacatctatatgaat 49
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tatatgtctagattcattaacatctatatgaatat 96
||||| ||||| |||||||||||||||||||||||
Sbjct: 82 tatatatctaggttcattaacatctatatgaatat 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||| ||| ||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattg 43
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 83.8 bits (42), Expect = 6e-16
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatata---t 66
||||| |||||||||| || ||||||||||||||||||| |||| || ||||||| |
Sbjct: 4 ctacttcctccgtttcttattataagactttctagcattacccacattcatatatatgtt 63
Query: 67 gtctagattcattaacatctatatgaat 94
|||||||||||||||||| |||||||||
Sbjct: 64 gtctagattcattaacatatatatgaat 91
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||||||||||||| || |||||| | || ||||||||||||||
Sbjct: 58 atatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||| |||| |||||||| |||||||||||||||||||| ||| || ||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgt 78
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatg 67
|||||||||||||||||||| |||||||||||||||||||||| || |||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatg 102
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaacta 150
||||||||||||||| ||||||| || |||||||||||| ||||||||| ||||||||
Sbjct: 105 atatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtaacta 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||| |||| |||||||||| |||||||||||||| ||||||| || ||||||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatata 57
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||| |||||||| || |||| || |||||||||||| |||| |||||||||
Sbjct: 57 tatataaatgtgggcaacgctagaaagtcttacattatgaaacagaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatat 90
|||||||||||||||||||| ||||||||
Sbjct: 82 atatatgtctagattcattagtatctatat 53
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 73/84 (86%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||||| ||||||| ||||||||||||||| | || ||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgccc------acattcatgtct 58
Query: 71 agattcattaacatctatatgaat 94
||||||||||||||||||||||||
Sbjct: 59 agattcattaacatctatatgaat 82
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgccca 84
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgccca 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||| ||||||| |||||||||||||||||||| |||||| || ||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattgtccatat----attcatgtct 73
Query: 71 agattcattaacatctatatgaat 94
|||||||||||| | |||||||||
Sbjct: 72 agattcattaacgtatatatgaat 49
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 129 ctactccctccgtttcatattataagactttctagcattgccca 86
Score = 69.9 bits (35), Expect = 1e-11
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||| ||||||| |||||||||||||||||||| |||||| || ||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattgtccatat----attcatgtct 60
Query: 71 agattcattaacatctatatgaat 94
|||||||||||| | |||||||||
Sbjct: 61 agattcattaacgtatatatgaat 84
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatat 56
|||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 116 gctacttcctccgtttcatattataagactttctagcattgcccatat 69
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattg 49
||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 4 ctactccctccgtttcatactataagactttctagtattg 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| |||| ||||||| || |||||| | ||| ||||||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 113/136 (83%), Gaps = 1/136 (0%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||| |||||||||||||| | |||||||||| |||||| ||||| ||| ||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatg-ct 81
Query: 71 agattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtcttacatta 130
||||||||||||| |||| ||||||| |||||| ||| ||| || | |||||||||
Sbjct: 80 taattcattaacatcaatataaatatattgatgtggaaaatactagaatgacttacatta 21
Query: 131 taaaacggaggaagta 146
| ||||||||| ||||
Sbjct: 20 tgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctag 44
|||||||||||||||||||| |||| | ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctag 38
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgccca 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgccca 100
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 77.8 bits (39), Expect = 4e-14
Identities = 77/90 (85%), Gaps = 6/90 (6%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca------tatgtatatat 64
|||| ||||||||| ||| ||||||||| ||||| |||||||| ||| |||||||
Sbjct: 5 tacttcctccgttttatattataagactatctagtattgcccacattcatatatatatat 64
Query: 65 atgtctagattcattaacatctatatgaat 94
|||||||||||||||| |||||||||||||
Sbjct: 65 atgtctagattcattagcatctatatgaat 94
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgccca 96
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgccca 47
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgccca 100
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 90 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat--gtatatatatgt 68
|||| ||||| ||||| | |||||||||||||||||||||||| || ||||| ||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatatatgtatgc 75
Query: 69 ctagattcattaacatctatatgaat 94
|||||||| |||||||||||||||||
Sbjct: 74 ctagattcgttaacatctatatgaat 49
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgccca 47
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgccca 47
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 160 gctacttcctccgtttcatattataagactttctagcattgccca 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||| |||||||||||||
Sbjct: 79 atatatatgtctagattcattagcatctatatgaat 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatga 92
||||||| ||| ||| |||||||||||||||||||
Sbjct: 85 tatatatgtgtataggttcattaacatctatatga 51
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgccca 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgc 50
||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgc 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| ||||||| ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 95 tatatgtatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 147
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 98 tgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||| | ||||||| || |||||||||| | ||||||||||||||
Sbjct: 53 tgaatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatcta 87
||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatcta 56
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgccca 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgccca 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||| | ||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||| | |||||||||||||||||||||||||
Sbjct: 82 atatatatatagattcattaacatctatatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaat 116
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||| | ||| ||||||||| ||||
Sbjct: 108 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgccca 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgccca 62
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||||||||||| ||||||| || |||||| | ||| ||||||||| |||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtaa 4
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgccca 98
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 88 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 140
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatat 113
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||||||||||||
Sbjct: 84 atatatatgtctagattcattaacatctatatgaat 49
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaatat 96
||||||| |||||||||||||||||||||||||||||||
Sbjct: 78 tatatatgtgtctagattcattaacatctatatgaatat 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| |||| |||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgccca 47
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatat 50
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||||||||| ||||||||||||||
Sbjct: 104 tatatgaatgtggacaatgctagaaagtcttacattatgaaacggaggaagta 156
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattg 49
||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattg 118
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 69 ctagattcattaacatctatatgaatata 97
||||||||||||||||| |||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatata 46
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 75.8 bits (38), Expect = 2e-13
Identities = 73/84 (86%), Gaps = 8/84 (9%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcattgcc----tgtacata----tct 73
Query: 71 agattcattaacatctatatgaat 94
||||| ||||||||||||||||||
Sbjct: 72 agatttattaacatctatatgaat 49
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattg 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 109 aatgctataacgtcttacattataaaacggaggaagta 146
||||||| || |||||||||||| ||||||||| ||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagggagta 124
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| ||||||||||||||
Sbjct: 106 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgccca 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| ||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcatt 42
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| | ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 57 tatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgccca 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgc 50
|||||||||||||||||||| ||||||||| |||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgc 119
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||||||
Sbjct: 86 tgtctagattcattaacatctatatgaat 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| | ||||||| || |||||||||||| ||||||||| ||||
Sbjct: 106 tatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 73.8 bits (37), Expect = 6e-13
Identities = 73/84 (86%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||| |||||||| | |||||||||| |||| || |||| || |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatcta--tct 62
Query: 71 agattcattaacatctatatgaat 94
||||||||||||||| ||||||||
Sbjct: 63 agattcattaacatcaatatgaat 86
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||||||||||||||||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaatat 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatat 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatat 96
|||||| ||||||||||||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatat 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| || ||||||||||||| | |||||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatat 50
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatat 50
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||| |||| ||||||| || |||||||||||| |||||||| ||||||
Sbjct: 57 tatatgaatatgggcaatgctagaaagtcttacattatgaaacggagaaagtaa 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagca 46
|||||||||||||||| ||| |||||||||||||||
Sbjct: 98 tactccctccgtttcacaatgtaagactttctagca 63
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattaccca 94
Score = 63.9 bits (32), Expect = 6e-10
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatg----tatatatat 66
|||| ||||||||||| ||||||||||||| | |||||| ||| || |||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagactttttggcattgtccacattaacatatacatat 64
Query: 67 gtctagattcattaacatctatatg 91
|| ||||||||||||||||||||||
Sbjct: 65 gtttagattcattaacatctatatg 89
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattaccca 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatg----tatatatat 66
|||| ||||||||||| ||||||||||||| | |||||| ||| || |||| ||||
Sbjct: 136 tacttcctccgtttcacaatataagactttttggcattgtccacattaacatatacatat 77
Query: 67 gtctagattcattaacatctatatg 91
|| ||||||||||||||||||||||
Sbjct: 76 gtttagattcattaacatctatatg 52
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgccca 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccc 52
|||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgccc 117
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 98 tgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||| ||||||| || |||||||||||| ||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaat 114
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
|||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 4 ctactccctcagtttcataatgtaagactttctagcattgccca 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaac 148
||||||||||||| ||||||| || |||||||||||| ||| ||||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagtaac 132
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||| ||||||||| |||||||||||||||||||||| | | |||| | |||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccaca--ttcatatgtttct 73
Query: 71 agattcattaacatc 85
|||||||||||||||
Sbjct: 72 agattcattaacatc 58
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgccca 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgccca 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| ||||||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 57 tatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||||||||||||||| |||||| ||||||
Sbjct: 83 atatgtctagattcattagcatctaaatgaat 114
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
|||| ||||||||||||| |||||||||||||| ||||||||| || |||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtc 63
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccat 54
|||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccat 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||| |||| |||||||||
Sbjct: 84 atatatatgtctagattcattgacatatatatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaa 93
||||||| ||| |||||||||| |||||||||||||
Sbjct: 78 tatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/88 (84%), Gaps = 8/88 (9%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctataa 118
||||||||||||||||||||||||||| || |||||||||| |||||||| ||
Sbjct: 84 atatatatgtctagattcattaacatc--------taaatgaatgtggataatgctagaa 33
Query: 119 cgtcttacattataaaacggaggaagta 146
|||||||||| | ||||||||||||||
Sbjct: 32 agtcttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| ||||||||||| ||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgccca 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||| ||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattacccatat 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||| |||||||||||| || |||||| | ||| ||||||||||||||
Sbjct: 62 tatatgaatatgggtaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||||||||| || |||||||||| | |||||||||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacggaggaagtaa 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| |||||||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatat 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattaccca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatgaatat 96
|||||||||||||||||||||| ||||
Sbjct: 90 tagattcattaacatctatatgtatat 116
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattg 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 75/89 (84%), Gaps = 5/89 (5%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatata-----ta 65
|||| ||||||||||||| |||||||||||||||||||| ||| || ||||| |
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgttg 78
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||| |||||||||||| |||||
Sbjct: 77 tgtctagatttattaacatctatgtgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||| | ||| ||||||||||||||
Sbjct: 85 tatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatata 65
|||| ||||||| |||||||||||||||||||||||||| |||||| |||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatatata 51
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcattgctcatat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 109 aatgctataacgtcttacattataaaacggaggaagta 146
||||||| || |||||| ||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttatattataaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||| ||| ||||||| || |||||| ||||| | ||||||||||||
Sbjct: 52 atatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgccca 45
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattaccca 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgccca 117
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||||||||||| || |||||| | ||| ||||||||| ||||
Sbjct: 57 tatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||| |||||||||||||||||||||||||||
Sbjct: 84 atatatctagattcattaacatctatatgaat 115
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||| ||||||||||| ||| |||||| |||||||||| |||| || |||| |||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtc 74
Query: 70 tagattcattaacatctatatgaatat 96
||||||||||| |||| |||| |||||
Sbjct: 73 tagattcattagcatcaatataaatat 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgccca 116
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagca 46
|||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagca 40
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/88 (84%), Gaps = 8/88 (9%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctataa 118
||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaat--------gtgggtaatgctataa 33
Query: 119 cgtcttacattataaaacggaggaagta 146
| |||||||| | ||||||||| ||||
Sbjct: 32 tgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgccca 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||| |||||| |||||| |||||||||| | |||||||||||||||
Sbjct: 54 atgaatggaggtaatactataaagtcttacattgtgaaacggaggaagtaa 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||| |||||| |||||||||||||||||| ||||||
Sbjct: 85 tatacatatgtttagattcattaacatctaaatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 tatatgtctagattcattaacatcta 87
|||||||||||||| |||||||||||
Sbjct: 82 tatatgtctagatttattaacatcta 107
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||||||||||| ||||||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatat 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 gctactccctccgtttcacaatgtaagtcattctagcatt 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||| ||| |||| | ||| |||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatat 50
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| ||||||| || |||||||||||||||||||| ||||||
Sbjct: 54 atgaatgtgggcaatgctaaaaagtcttacattataaaacggatgaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttcta 43
|||||||||||||||| ||||||||||||||||
Sbjct: 124 tactccctccgtttcacaatataagactttcta 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 18 tccgtttcataatataagactttctagcattgccca 53
||||||| ||||| ||||||||| ||||||||||||
Sbjct: 12 tccgttttataatgtaagactttttagcattgccca 47
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||||||||||
Sbjct: 81 atatatgtctagattcattaacatctatatgaat 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgccca 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| ||||||||||||| | |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatat 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatat 96
|||||| ||||||||||||||||||||||||
Sbjct: 77 tgtctaaattcattaacatctatatgaatat 47
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatat 50
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/84 (83%), Gaps = 8/84 (9%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtc 122
||||||||||||||||||||||||| ||||||| |||| ||||||| || |||
Sbjct: 83 atatgtctagattcattaacatctaaatgaata--------tgggcaatgctaaaaagtc 134
Query: 123 ttacattataaaacggaggaagta 146
||||||| | ||||||||||||||
Sbjct: 135 ttacattgtgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||| ||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatat 113
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||||||||||
Sbjct: 82 atatatgtctagattcattaacatctatatgaat 49
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||| ||||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattg 43
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctag 44
|||||||||||||||||||| |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctag 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatgaat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaact 149
||||||||||||| || ||| || |||||||||||| ||||||||| |||||||
Sbjct: 106 tatatgaatgtggacaaacctagaaagtcttacattatgaaacggagggagtaact 161
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||||||||||||||||| ||| |||| | |||||||||| ||| || |||| ||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 69 ctagattcattaacatctatatgaat 94
|||||||||||||||| ||||||||
Sbjct: 63 ttagattcattaacatcaatatgaat 88
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcat 47
|||||| ||||||||||| |||||||| | |||||||||
Sbjct: 134 gctacttcctccgtttcacaatataagtcattctagcat 96
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatat 50
Score = 63.9 bits (32), Expect = 6e-10
Identities = 71/85 (83%), Gaps = 8/85 (9%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtc 122
||||||||||||||||||||||||| ||||||| |||| ||||||| || |||
Sbjct: 80 atatgtctagattcattaacatctaaatgaata--------tgggcaatgctagaaagtc 29
Query: 123 ttacattataaaacggaggaagtaa 147
||||||| | |||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagtaa 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgccca 116
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||||||||||| ||||||||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||| ||| |||| | ||| |||||| |||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatat 111
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||||||||||| ||||||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatat 47
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| ||||||||||||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 64 tatgtctagattcattaacatctatatgaatata 97
||||||||||||||||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaacatctatatgaatata 46
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||||||| |||| | ||||||||||||| ||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatat 50
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||| |||||||||||||||||| ||||||||
Sbjct: 83 atatatctagattcattaacatccatatgaat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| | | ||||| || | |||||||||| ||||||||||||||
Sbjct: 107 atatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||||||||| || ||||| |||||| ||||||||||||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttgcattatgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcc 51
|||||||||||||||||| ||| |||||||||||| |||||||
Sbjct: 160 gctactccctccgtttcacaatgtaagactttctaacattgcc 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctat 88
||||||||||||||||||||||||||||||
Sbjct: 79 atatatatgtctagattcattaacatctat 108
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattaccca 47
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||||||||||||||||| ||||||||| |||||| | |||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcatcgtccatatttatata 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||| |||||||| |||||||||||||||| ||| || | |||||| ||||||
Sbjct: 115 gctacttcctccgttccataatataagactttttagtatcgtccatatttatata 61
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagacttacattatgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgc 50
|||||||||||||||||||| ||||||||| |||||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgc 117
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| |||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgccca 47
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaatata 97
||||||||||||||||||||||||| |||||||||
Sbjct: 81 atatgtctagattcattaacatctagatgaatata 115
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||||||||||||| ||||||||||||| |||||| | |||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagactttttagcatcgtccatatttatata 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcat 47
|||||| ||||||||||||||| ||||| ||| ||||||
Sbjct: 115 gctacttcctccgtttcataatgtaagattttttagcat 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 121 tcttacattataaaacggaggaagta 146
||||||||||| ||||||||||||||
Sbjct: 88 tcttacattatgaaacggaggaagta 113
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||||||||||||||||||||||
Sbjct: 85 tatatagatgtctagattcattaacatctatatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 106 tatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 60 tatatatgtctagattcattaacatctatatgaat 94
||||||| | ||||||||| |||||||||||||||
Sbjct: 80 tatatatatttagattcatcaacatctatatgaat 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttccca 116
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| |||||||||||||||||||||||||||||
Sbjct: 61 tatatatgtgtctagattcattaacatctatatgaat 25
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||| ||||||||||||||
Sbjct: 55 atatatatgtctagattcatttacatctatatgaat 90
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 78 atatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 129
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||||||| |||| | |||||||||| ||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttccca 87
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 77/92 (83%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtata-----tat 64
||||||||||||||||||||| ||| ||||| ||||||||| ||||| ||| |||
Sbjct: 4 ctactccctccgtttcataatgtaatactttatagcattgctcatatacatatagactat 63
Query: 65 atgtctagattcattaacatctatatgaatat 96
||| || ||||||||||||||||||| ||||
Sbjct: 64 gtgtttaaattcattaacatctatatgtatat 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||| ||| |||||| || ||||||||| |||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 92
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 68/81 (83%), Gaps = 8/81 (9%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtctta 125
|||||||||||||||||||||||||||||| |||||||||||| || | ||||
Sbjct: 86 tgtctagattcattaacatctatatgaata--------tgggtaatgctagaatgactta 137
Query: 126 cattataaaacggaggaagta 146
|||||| ||||||||| ||||
Sbjct: 138 cattatgaaacggagggagta 158
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||||||| |||| | |||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatat 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| ||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 57 tatatgtatgtgggcaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||||||| |||| | |||||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgccca 47
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 14 tccctccgtttcataatataagactttctagcattg 49
||||||||||||||||| ||||||||||||||||||
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattg 70
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
||||||||||||| ||||||| || |||||||||||| |||||||||
Sbjct: 56 tatatgaatgtggacaatgctagaaagtcttacattatgaaacggagg 103
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaat 94
||||||||||| |||||||||||||||||
Sbjct: 36 tgtctagattcgttaacatctatatgaat 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagacttt 40
||||| ||||||||||||||| |||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagacttt 34
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 120 gtcttacattataaaacggaggaagta 146
|||||||||||| ||||||||||||||
Sbjct: 31 gtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| ||||||||
Sbjct: 79 atatatatgtctagattcattaacatcaatatgaat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| |||||||||| | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgctataatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttccca 116
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattg 49
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattg 102
Score = 54.0 bits (27), Expect = 6e-07
Identities = 75/92 (81%), Gaps = 8/92 (8%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatata------- 63
|||||||||||||||| ||| ||||||||| ||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgtat 64
Query: 64 -tatgtctagattcattaacatctatatgaat 94
| |||||||||| ||||||||||||||||||
Sbjct: 65 gtgtgtctagatttattaacatctatatgaat 96
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||||||| | ||||||||| ||||
Sbjct: 88 tatatgaatgtggacaatgctagaaagtcttacattgtgaaacggagggagta 140
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| ||||||||
Sbjct: 78 atatatatgtctagattcattaacatcaatatgaat 113
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 77/92 (83%), Gaps = 5/92 (5%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtata-----tat 64
||||||||||||||||||||| ||| ||||| ||||||||| ||||| ||| |||
Sbjct: 138 ctactccctccgtttcataatgtaatactttatagcattgctcatatacatatagactat 79
Query: 65 atgtctagattcattaacatctatatgaatat 96
||| || ||||||||||||||||||| ||||
Sbjct: 78 gtgtttaaattcattaacatctatatgtatat 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||| ||| |||||| || ||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatat 50
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||| |||||||||
Sbjct: 50 atatatatgtctagattcattaacatatatatgaat 15
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||||||||| |||||||||
Sbjct: 43 atatatatctagattcattaacatatatatgaat 76
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| ||||||||
Sbjct: 53 atatatatgtctagattcattaacatcaatatgaat 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| | |||||||||||||||||| ||||||||
Sbjct: 59 tatatatctatctagattcattaacatcaatatgaat 23
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 121 ctactccctccgtttcacaatgtaagagtttctagcattgccca 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| || |||| || |||||||||| | ||||||||||||||
Sbjct: 57 tatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| ||| |||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgccca 47
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || ||||||||| | ||||||||| ||||
Sbjct: 68 tatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 64 atatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaagta 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcat 47
|||||||||||||||||| ||| |||| | |||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcat 41
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||||||| |||| | |||||||||| ||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttccca 73
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgc 50
|||||||||||||||||||| |||| ||||||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcattgc 44
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagc 45
|||| ||||||||||||||| |||| |||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||||||||| ||||||||||
Sbjct: 72 atatatgtctagattcattaacatcaatatgaatat 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| |||||||| | || ||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatat 104
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||
Sbjct: 160 gctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgt 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||| |||||||| |||||||||
Sbjct: 84 atatatatgtctagatttattaacatatatatgaat 49
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgt 62
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| ||||||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaat 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||| ||||||||||||| ||||||||
Sbjct: 84 atatatatgtctacattcattaacatcaatatgaat 49
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| ||||||||
Sbjct: 58 atatatatgtctagattcattaacatcaatatgaat 23
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatat 64
||||||||||||||||||||| |||| | |||||||||| |||| || |||||||
Sbjct: 129 ctactccctccgtttcataatgtaagtcattctagcatttcccacatctatatat 75
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatata 97
|||||||||||||||||||||| |||| |||||||||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatgaatata 117
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcatt 121
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgccca 47
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||| |||||||| || |||||||||||||||||||||
Sbjct: 139 ctacttcctccgttccacaatataagactttctagcatt 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 62 tatatgtctagattcattaacatctat 88
||||||| |||||||||||||||||||
Sbjct: 81 tatatgtttagattcattaacatctat 55
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||| ||||||||| || |||||| ||| | |||||||||||||
Sbjct: 89 atgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagta 138
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 60 tatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||| ||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||||||| |||| | ||||||||||||| ||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcattgcctatat 113
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaatata 97
||||||||||||||||||||||||||||||
Sbjct: 88 tctagattcattaacatctatatgaatata 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| | | ||||| || | |||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtgagcattgctagaatgacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||| |||||||||||||||||| ||||||||
Sbjct: 80 atatatctagattcattaacatccatatgaat 49
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
||||||||| |||||||||| ||||||||| ||||||||||||
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgccca 116
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||| |||| |||||||||| |||||||||||||| ||||||| || ||||||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgt 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||||| || |||| || |||||||||||| |||| |||||||||
Sbjct: 58 atatatgaatgtgggcaaggctagaaagtcttacattatgaaaccgaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || |||||||||||| |||| |||| ||||
Sbjct: 106 tatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||||| |||||||||| | ||||||||||||
Sbjct: 81 atatatgtttagattcattgatatctatatgaat 114
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 21 gtttcataatataagactttctagcattgcccatatgtatatatatgtctagattcatta 80
|||||| ||| |||| | |||||||||| ||| || ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatatatatgtctagattcatta 74
Query: 81 acatctatatgaata 95
|||| |||||||||
Sbjct: 75 tcatcaatatgaata 89
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 14 tccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| |||||||||||||||||
Sbjct: 8 tccctccgtttcataatgtaagactttctagcatt 42
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
||||||||| ||| |||||||| || |||||||||||| |||||||||
Sbjct: 57 tatatgaatatggttaatgctagaaagtcttacattatgaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatat 96
||||||||||| |||||||||||||||||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatat 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagacttt 40
||||| ||||||||||||||| |||||||||
Sbjct: 109 ctacttcctccgtttcataatgtaagacttt 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 120 gtcttacattataaaacggaggaagta 146
|||||||||||| ||||||||||||||
Sbjct: 82 gtcttacattatgaaacggaggaagta 108
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||||| ||||||||||| |||||||
Sbjct: 4 ctactccctccgtttcatattataagactttatagcatt 42
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| ||||||||||||| |||||||||||||||||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcatt 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||||||| |||||| | ||| ||||||||| ||||
Sbjct: 57 tatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||| ||||||| |||||||| || |||||| | ||| |||||||||||||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagtaa 115
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattg 43
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattg 49
||||| ||||||||||| ||| ||||||||| ||||||||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattg 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatat 90
|||||||||||||||||||||||
Sbjct: 73 tctagattcattaacatctatat 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 100 aatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 110 aatgtggacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
||||||||| |||||||| ||||||||||||||| ||||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgccca 47
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 92 tagattcattaacatctatatgaat 116
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||| | ||| ||||||||||||||||||| |||||
Sbjct: 109 ctactccctccgttttacaatgtaagactttctagcattgctcatat 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatataagactttctagcattg 49
||||||||||||||| ||| ||||||||||||||
Sbjct: 10 cctccgtttcataatgtaaaactttctagcattg 43
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||| || | ||||||| || |||||||||| ||||||||||| ||||
Sbjct: 56 tatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa
Japonica Group
Length = 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 75/90 (83%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatata-----t 64
||||| ||||||||||||||| |||| ||||||||||||||| || | ||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagttattctagcattgcccacattcacatagatgct 63
Query: 65 atgtctagattcattaacatctatatgaat 94
||||||||||| ||||||||||||||||||
Sbjct: 64 atgtctagatttattaacatctatatgaat 93
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 98 tgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||| ||||||| || |||||||||| ||||||||||||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||||||| |||| |||||||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattg 99
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaac 148
||||||||||||| ||||||| || | |||||||||| ||||||||| ||||||
Sbjct: 87 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtaac 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| |||| | |||||||||| ||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttccca 96
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
|||| ||||||||||||||| |||| | ||||||||||||||| || |||||| ||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgt 101
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| |||||||||| || | |||||||||| ||||||||| ||||
Sbjct: 57 tatatgaatgttggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaat 49
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 101 atgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||| ||||||| || | |||||||||| |||||||||||||||
Sbjct: 113 atgtgggcaatgctagaatgacttacattatgaaacggaggaagtaa 159
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||||||| ||||||||||| |||| | ||||||||||
Sbjct: 148 gctactcccttcgtttcataatgtaagtcattctagcatt 109
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||| |||||||||||| ||||||
Sbjct: 130 tactccctccgtttcatactataagactttcaagcatt 93
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| |||| |||||||| |||||||||||| |||||||| |||||
Sbjct: 5 tacttcctctgtttcatactataagactttcaagcattgcacatat 50
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatata 63
||||||||||||||||||||| |||| | ||||| |||||||||||| |||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctaatattgcccatatgcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 76/90 (84%), Gaps = 4/90 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcc--cat--atgtatatatat 66
|||| ||||||||||||||| |||| | ||||||||||| | ||| || || |||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagatataa 77
Query: 67 gtctagattcattaacatctatatgaatat 96
||||||||||||||| ||||||||| ||||
Sbjct: 76 gtctagattcattaatatctatatgcatat 47
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| | ||||||| || | |||||||||| ||||||||||||||
Sbjct: 84 tatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 84 atatatatgtatagattcattaacatcaatatgaatat 47
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| | |||||||||||||||||| ||||||||
Sbjct: 78 tatatatttatctagattcattaacatcaatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||||||||| ||||||||| |||| | |||||||||| | || || |||| | |||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatattt--gtc 74
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||| ||||||||
Sbjct: 73 tagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa
Japonica Group
Length = 114
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattgcccatatgtatatatatgt 68
|||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgt 38
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||| ||||||||||||||||||||||||||
Sbjct: 57 atatatgcctagattcattaacatctatatgaat 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaatat 96
||||| |||| |||||||||||||||| |||||||||||
Sbjct: 61 tatatgtatgcctagattcattaacatatatatgaatat 23
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattgccca 53
|||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgccca 92
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| | |||||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgccca 47
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||| ||||||||||||||||||||||||
Sbjct: 82 atatatgtccagattcattaacatctatatgaat 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| |||||||| | |||||| ||||||||
Sbjct: 158 gctactccctccgtttcacaatataagtcattctaggattgccca 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaa 143
|||||||||||||| ||||||| || | |||| ||||| |||||||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaatgacttatattatgaaacggaggaa 8
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | |||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||| ||||||||
Sbjct: 82 atatgtttagattcattaacatcaatatgaat 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 106 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttccca 115
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 69 ctagattcattaacatctatatgaat 94
||||||||||||||||| ||||||||
Sbjct: 74 ctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | |||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | |||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | |||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcc 51
|||| ||||||||||| ||| ||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattgcc 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||| ||||||||||| ||| |||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcattg 43
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 109 aatgctataacgtcttacattataaaacggaggaagta 146
||||||| || |||||||||| | ||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 112/140 (80%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt- 68
||||||||||||||||||||| |||| | |||||||||| |||| || |||| ||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 69 --ctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtcttac 126
||||||||||| ||||| |||||||| ||||| ||||||| || | |||||
Sbjct: 76 gtctagattcattgacatcaatatgaat--------gtgggaaatgctagaatgacttac 25
Query: 127 attataaaacggaggaagta 146
||| | ||||||||||||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 84 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 54 tatgtatatatatgtctagattcattaacatctatatgaat 94
|||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 89 tatgcatatatatgtcttgattcattaacatctacatgaat 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||| |||||||||||||||||||||||||
Sbjct: 77 atatatatgcatagattcattaacatctatatgaat 112
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 106 tatatgaatgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt 68
||||| ||||||||||||||| |||| | ||||||| || |||||||| ||||| ||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgt 62
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||||| |||| | || ||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgccca 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/79 (82%), Gaps = 8/79 (10%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaatatatgaatgtgggtaatgctataacgtcttaca 127
|||||||||||||||||||||||| |||| |||||| |||| || | ||||||
Sbjct: 75 tctagattcattaacatctatatgcatat--------gggtaaggctagaatgacttaca 24
Query: 128 ttataaaacggaggaagta 146
|||| ||||||||||||||
Sbjct: 23 ttatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||| |||||||||||||
Sbjct: 83 atatgtttagattcattaccatctatatgaat 114
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 62 tatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||| ||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaat 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||||||||||| ||||||||||
Sbjct: 78 tatatagatgtctagattcattaacacctatatgaat 114
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 60 tatatatgtctagattcattaacatctatatgaat 94
||||||| |||||||||||||||| ||||||||||
Sbjct: 83 tatatatatctagattcattaacacctatatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | ||||||||| |||||
Sbjct: 106 tatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaa 159
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | |||||||||||||||
Sbjct: 92 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtaa 144
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||||||||| |||||||||||| |||||||||||||
Sbjct: 85 tatatatatgcctagattcattagcatctatatgaat 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||||||| ||||||||||||||||||| ||||||||
Sbjct: 78 tatatataagtctagattcattaacatcaatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaac 148
|||||||||||| ||||||| || | |||||||| | ||||||||| ||||||
Sbjct: 107 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaac 160
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgc 50
||||||||||||||||| ||| |||||||| ||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgc 44
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaat 49
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| ||||||||| || |||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttttaacattgccca 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||||||||||||| |||||
Sbjct: 81 atatatatctagattcattaacatctatgtgaat 114
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
|||||| ||||||||||||||||||| ||||||||||
Sbjct: 55 tatatagatgtctagattcattaacacctatatgaat 19
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 60 tatatatgtctagattcattaacatctatatgaat 94
||||||| |||||||||||||||| ||||||||||
Sbjct: 50 tatatatatctagattcattaacacctatatgaat 84
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa
Indica Group
Length = 114
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| || ||||||||||||||||||||||||||
Sbjct: 54 tatatatgtgcctagattcattaacatctatatgaat 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||| ||||||||||||||||| |||||||||
Sbjct: 60 atatatatatctagattcattaacatatatatgaat 25
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||||||||||| || ||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgt 38
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattgccca 53
|||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgccca 92
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagca 46
||||||||||||||||| ||||||||||||| |||||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagca 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||| ||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaat 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| ||| ||||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgccca 47
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 tatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||| ||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaat 95
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||||||| |||| | ||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||| |||||||||||||||||||| | ||||| ||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacatt 102
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa
Japonica Group
Length = 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 74/88 (84%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatat--gt 68
|||||||||||||||||||| |||| | ||||| |||| ||| || |||||||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatatatattcat 64
Query: 69 ctagattcattaacatctatatgaatat 96
|||||||||||||||| ||||||||||
Sbjct: 65 ctagattcattaacattaatatgaatat 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||||||||||| |||| || || | |||||||||| ||||||||| |||||
Sbjct: 58 atatatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagtaa 4
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgc 50
|||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgc 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||| ||||| | ||||||| || |||||||||| | |||||||||||||||
Sbjct: 106 tatatgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagtaa 159
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 120 gtcttacattataaaacggaggaagtaa 147
|||||||||| |||||||||||||||||
Sbjct: 31 gtcttacattgtaaaacggaggaagtaa 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
||||||||| ||||||||||||||| ||||||
Sbjct: 80 atatgtctatattcattaacatctaaatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 tagattcattaacatctatatg 91
||||||||||||||||||||||
Sbjct: 90 tagattcattaacatctatatg 111
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatt 103
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||| ||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaat 96
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||| ||||||||||||||| |||| | ||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || |||||||||| | ||||||| ||||||
Sbjct: 75 atatgaatgtgggcaatgctagaaagtcttacattgtgaaacggatgaagta 126
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 18 tccgtttcataatataagactttctagcattgccca 53
||||||||| ||| ||||||||||||||||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgccca 84
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccatttcataatgtaagactttctagcattg 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 109 aatgctataacgtcttacattataaaacggaggaagtaa 147
||||||| || |||||||||||| ||| |||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaatggaggaagtaa 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatat 90
||||||||||||||||||||||||||| ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatat 53
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 87 atatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||||| |||| | || ||||||| ||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttccca 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| |||| ||||||||||||||| | ||||||||||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcatt 42
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 84 atatatatgtctagattcattaatatcaatatgaat 49
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 92 aatatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| | ||||||| || | |||||||| | ||||||||||||||
Sbjct: 104 aatatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 79 atatatatgtctagattcattaatatcaatatgaat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||| ||| || |||||||||| | ||||||||| ||||
Sbjct: 107 atatgaatgtgggaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||||| |||||| ||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttccca 116
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||||| |||| | ||||||||||
Sbjct: 128 gctactccctccgtttcataatgtaagtcattctagcatt 89
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||| ||||||||||| |||||||| | ||||||||||
Sbjct: 3 gctacttcctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | |||||||||| ||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttccca 90
Score = 48.1 bits (24), Expect = 4e-05
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||||||||| ||| |||| | |||||||||| |||| || |||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 64
Query: 71 agattcattaacatctatatgaat 94
|||||||||| ||| ||||||||
Sbjct: 65 agattcattagcattaatatgaat 88
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||| ||||||||||||||| |||| | ||||||||||
Sbjct: 3 gctacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 64 tatgtctagattcattaacatctatatgaat 94
||||||||| |||||||||||| ||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaat 102
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgc 50
|||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgc 121
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||||||||| || |||||||||| | |||| |||| |||||
Sbjct: 54 atgaatgtgggtaatgctagaaagtcttacattgtgaaacagagggagtaa 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
||||||||| |||||| ||| ||||||||||||||||| ||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattaccca 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||||| ||||||
Sbjct: 80 atatgtttagattcattaacatctaaatgaat 49
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatat 62
|||||||||||||||| ||| |||| | |||||||||| | ||||| |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatat 94
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||| |||| ||||||||
Sbjct: 79 atatatatgtctagattcattaccatcaatatgaat 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 65 atgtctagattcattaacatctatatgaat 94
||||||||||||||||||||| ||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 98 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttccca 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 79 tctagattcattaacatcaatatgaat 105
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 93 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatggcttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttccca 47
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||| ||| ||||||||
Sbjct: 84 atatatatgtctagattcattaatatcaatatgaat 49
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| | ||||||| || |||||||| | ||||||||||||||
Sbjct: 58 atatatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||| |||||||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||| ||||||||
Sbjct: 79 atatatatgtctagattcattaacattaatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatat 50
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttccca 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||| ||||||||||| ||| |||| | |||||||||| |||| || |||| || |||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatct 73
Query: 71 agattcattaacatctatatgaat 94
|||||||||| ||| ||||||||
Sbjct: 72 agattcattagcattaatatgaat 49
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 21 gtttcataatataagactttctagcattgcccatat 56
|||||||||| |||||||||||||||||| ||||||
Sbjct: 15 gtttcataatgtaagactttctagcattgtccatat 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 94 tactctctccgtttcacaatgtaagactttctagcattg 56
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| |||||||
Sbjct: 83 atatatatgtctagattcattaacatcactatgaat 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 73/89 (82%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaatatatgaatgtgggtaatgctata 117
||||||| | |||||||||||||||||| |||| ||||||| || | ||||||| |
Sbjct: 89 tatatatctatctagattcattaacatcactatg----tatgaatatgcgaaatgctaga 34
Query: 118 acgtcttacattataaaacggaggaagta 146
| | |||||||| | ||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttccca 120
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 112 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 101 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 152
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||||| |||| | |||||||||| ||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttccca 110
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| |||| || || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgatagaatgacttacattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 65 atgtctagattcattaacatctatatgaat 94
||||||||||||||| ||||| ||||||||
Sbjct: 78 atgtctagattcattgacatcaatatgaat 49
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatt 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| |||| ||||||||
Sbjct: 75 atatatgtctagattcattagcatcaatatgaat 108
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttccca 79
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 83 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 134
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||| ||||||||||||| ||||||||
Sbjct: 79 atatatatgtctacattcattaacatcaatatgaat 114
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||||||| || | |||||||| | ||||||||| |||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtaa 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| | |||||||||||||||||| ||||||||
Sbjct: 85 tatatatctatctagattcattaacatcaatatgaat 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||| |||| ||||||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||| |||||||
Sbjct: 84 atatatatgtctagattcattaacatcactatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||| |||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 89 atatgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 140
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||||||| |||| | |||||||||| |||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatat 95
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaatat 96
|||||||||||||||||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatat 47
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 84 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 135
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 79 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | |||||||||| ||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttccca 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||| ||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaat 96
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||||||||| ||||||||
Sbjct: 79 atatatatgtctagattcattaacattaatatgaat 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||||| | ||||||||
Sbjct: 79 atatatatgtctagattcattaacaacaatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatg 91
||||||| | |||||||||||||||||| |||||
Sbjct: 85 tatatatctatctagattcattaacatcaatatg 52
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaatat 96
|||||||||||||||||||| ||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatat 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| |||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||||||| |||| | |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatat 94
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 73/88 (82%), Gaps = 4/88 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatat----atat 66
|||| ||||||||||| ||| |||| | |||||||||| ||||||| |||| || |
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 78
Query: 67 gtctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 77 atctagattcattaacatcaatatgaat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaac 148
|||||||| |||| ||||||| || | |||||||| | ||||||||||||||||
Sbjct: 86 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtaac 139
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | |||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttccca 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||| |||||||||||||| ||| ||||||||
Sbjct: 79 atatatatatctagattcattaatatcaatatgaat 114
>RF00906;MIR1122;AAAA02014181.1/4882-4767 39946:Oryza sativa Indica
Group
Length = 116
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 120 gtcttacattataaaacggaggaagta 146
|||||||||||||||||||||||||||
Sbjct: 31 gtcttacattataaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactt 39
|||||||||||||||||||| ||||||||
Sbjct: 112 tactccctccgtttcataatgtaagactt 84
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||||||| |||| | ||||||||||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatt 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 53 tctagattcattaacatcaatatgaat 79
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 55 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatg 91
|||||||||||||||||||||| |||| |||||
Sbjct: 79 atatatatgtctagattcattagcatcaatatg 111
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
||||||||||||| ||||||| || | |||||||||| |||||||||
Sbjct: 107 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagg 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 12 actccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||| |||| | |||||||||| ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttccca 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||| |||| || ||||||||
Sbjct: 79 atatatatgtctagattcactaacctccatatgaat 114
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattg 49
|||||||||||||||| ||| |||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattg 43
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatat 56
||||||||||||||||||||| |||| | |||||| ||| |||||||
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatat 91
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 67 gtctagattcattaacatctatatgaatat 96
|||||||||||||| |||| ||||||||||
Sbjct: 65 gtctagattcattagcatcaatatgaatat 94
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatat 96
|||||||||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatat 47
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||| |||| ||||||| || | |||||||||| ||||||||||||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagta 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||||||| |||| | |||||||||| |||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatat 94
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| |||||||| | ||||||||||
Sbjct: 4 ctactccctccgtttcacaatataagtcattctagcatt 42
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 137 gctacttcctccgtttcacaatataagtcattctagcatttccca 93
>RF00906;MIR1122;AP008208.1/30605453-30605313 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 6e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataaga 36
|||||||||||||||||||||||||||
Sbjct: 138 ctactccctccgtttcataatataaga 112
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatata 65
|||||||||||||||| ||| |||| | |||||||||| |||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatatata 59
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttccca 107
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttccca 47
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 73/88 (82%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatat----atat 66
|||| ||||||||||| ||| |||| | |||||||||| ||||||| |||| || |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatatct 64
Query: 67 gtctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 65 atctagattcattaacatcaatatgaat 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||| |||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 gtctagattcattaacatctatatgaatat 96
||||||||||||||||||| ||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatat 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagt 145
|||| |||||| | ||||||| || | |||||||||| |||||||||||||
Sbjct: 56 atataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 6
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatt 108
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| |||| ||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaat 81
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||| |||||||||||||
Sbjct: 60 atatatgtctagattcatttgcatctatatgaat 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacatt 129
||||||||||||| ||||||| || ||||||||||
Sbjct: 35 atatgaatgtgggcaatgctagaaagtcttacatt 1
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 taagactttctagcattgccca 53
||||||||||||||||||||||
Sbjct: 5 taagactttctagcattgccca 26
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaatata 97
|||||||||||||||||| |||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatata 105
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| |||| || || | |||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatggtaaaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataag 35
|||||||||||||||||||||| ||||
Sbjct: 3 gctactccctccgtttcataatgtaag 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||||||| ||||||||||| |||| ||||||||||
Sbjct: 79 atatatatgtttagattcattagcatcaatatgaatat 116
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||||| ||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaat 86
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||| ||||| ||||||||
Sbjct: 81 atatatgtctagattcattgacatcaatatgaat 114
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||| |||| ||||||||
Sbjct: 84 atatatatgtctagattcattggcatcgatatgaat 49
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||||||||||| || |||| || |||||||||| | |||| ||||||||||
Sbjct: 62 tatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagaggaagtaa 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| |||| |||||| ||| |||||||||||||| |||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgccca 72
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 tatatatgtctagattcattaacatc 85
|||||||||||||||||| |||||||
Sbjct: 80 tatatatgtctagattcactaacatc 105
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaatata 97
|||||||||||||||||| |||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatata 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| |||| || || | |||||||||| ||||||||| ||||
Sbjct: 95 atatgaatgtgggaaatggtaaaatgacttacattatgaaacggagggagta 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 76 tctagattcattaacatcaatatgaat 102
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataag 35
|||||||||||||||||||||| ||||
Sbjct: 148 gctactccctccgtttcataatgtaag 122
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 65 atgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| |||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaat 25
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 ctagattcattaacatctatatgaat 94
||||||||||||||||||||||||||
Sbjct: 65 ctagattcattaacatctatatgaat 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattgccca 53
|||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgccca 92
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||||||| ||| || ||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgt 38
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||||| ||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||| |||| ||||||||
Sbjct: 84 atatatatgtctagattcattggcatcgatatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctag 44
|||||||||||||||||||| |||| | ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctag 125
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaatata 97
|||||||||||||||||| |||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatata 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||| ||||||| ||||||||||||| ||||||||
Sbjct: 79 atatagatgtctatattcattaacatcaatatgaat 114
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacat 84
||||||||||||||||||||||||||
Sbjct: 84 atatatatgtctagattcattaacat 59
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatat 50
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatt 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatat 90
|||||||||||||||||||||| |||| ||||
Sbjct: 79 atatatatgtctagattcattatcatcaatat 110
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaatata 97
|||||||||||||||||| |||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatata 46
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttccca 72
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||||||||| | ||||| || | |||||||||| |||||||||||||||
Sbjct: 56 atatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaagtaa 4
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| ||||||||
Sbjct: 64 tgtctagattcattaacatccatatgaat 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||| |||||||||||||||||| ||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaat 21
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagact 38
||||||||||||||||||| |||||||||
Sbjct: 4 ctactccctccgtttcatattataagact 32
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattg 49
||||||||||||||||||| ||||||| || ||||||||
Sbjct: 72 ctactccctccgtttcatattataagatcttttagcattg 33
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
||||||||||||| ||| ||| || | |||||||| | |||||||||||||||
Sbjct: 58 atatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagtaa 110
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatat 62
||||||||||||||||| ||| |||| | |||||||||| |||| || |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaaca 83
|||||||||||||||||||||||||
Sbjct: 84 atatatatgtctagattcattaaca 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
||||||||||||| || |||||||| | ||||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatt 121
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 57 tatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 70 tagattcattaacatctatatgaat 94
|||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaat 49
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 72 tatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 126 gctactccctccgtttcacaatgtaagtcattctagcatttccca 82
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| | |||||||||||||||||| ||||||||
Sbjct: 85 tatatatctatctagattcattaacatcaatatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||||||||| ||| | ||||||
Sbjct: 79 atatatatgtctagattcattaatatcaacatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 50.1 bits (25), Expect = 9e-06
Identities = 72/87 (82%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
|||||| |||||||||||||| |||| | |||||||||| |||||| |||| ||||
Sbjct: 130 ctactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt- 72
Query: 70 tagattcattaacatctatatgaatat 96
||||||||||||| ||||||||||
Sbjct: 71 --aattcattaacatcaatatgaatat 47
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatat 62
||||||||||||||||| ||| |||| | ||||| |||| ||||||| |||||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatat 106
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||| ||| |||| | |||||||||| |||||| ||||||| | |
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatata--tat 73
Query: 71 agattcattaacatctatatgaat 94
| ||||||||||| | ||||||||
Sbjct: 72 atattcattaacagcaatatgaat 49
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| | ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 50.1 bits (25), Expect = 9e-06
Identities = 71/86 (82%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtct 70
|||||||||||||||||||| |||| | || ||||||| | || ||||||| | |||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttcaca----tatatatctatct 73
Query: 71 agattcattaacatctatatgaatat 96
|||||||||| |||| |||| |||||
Sbjct: 72 agattcattatcatcaatataaatat 47
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgtc 69
||||| ||||||||||| ||| |||| | |||||||||| |||||| |||| ||||
Sbjct: 132 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Query: 70 tagattcattaacatctatatgaat 94
|||||||| ||||||| ||||||||
Sbjct: 72 tagattca-taacatcaatatgaat 49
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 50.1 bits (25), Expect = 9e-06
Identities = 72/87 (82%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatatatatgt-- 68
|||| ||||||||||| |||||||| | |||||||||| ||| || |||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Query: 69 -ctagattcattaacatctatatgaat 94
||||||||||||||||| ||||||||
Sbjct: 65 tctagattcattaacatcaatatgaat 91
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| | ||||| |||| ||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttccca 93
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa
Indica Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 60 tatatatgtctagattcattaacatctatatgaatat 96
|||| ||||||||||| ||||||||| ||||||||||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatat 94
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| ||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaat 103
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 9 gctactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 3 gctactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||||||| ||||||| |||| ||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaat 15
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
||||||||||||||||| |||| |||| ||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaat 102
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 70 tagattcattaacatctatatgaatata 97
||||||||||| ||||||||||||||||
Sbjct: 73 tagattcattagcatctatatgaatata 46
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat 94
|||||||||| || |||||||| |||||||||||||
Sbjct: 79 atatatatgtttaaattcattagcatctatatgaat 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatt 121
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatat 62
|||||||||||||||| ||| |||| | |||||||||| |||||| |||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatat 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaacta 150
||||||||||| | ||||||| || | |||| ||| | ||||||||||||||||||
Sbjct: 84 atatgaatgtgagaaatgctagaatgacttatattgtgaaacggaggaagtaacta 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| ||||||||||| |||||||| | ||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatt 98
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||| || ||||||| || | |||||||| | ||||||||||||||
Sbjct: 75 atatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaagta 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| ||||| |||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaat 23
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 65 atgtctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||| |||||
Sbjct: 90 atgtctagattcattaacttctatgtgaat 119
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | |||||||||||||
Sbjct: 95 atatgaatgtgggaaatgctagaatgacttacattgtggaacggaggaagta 146
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttccca 94
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||| || ||||||| || | |||||||| | ||||||||||||||
Sbjct: 63 atatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagta 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttccca 77
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||| |||||||||||||||| ||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaa 93
|||||||||||||||||| |||||||
Sbjct: 80 tctagattcattaacatcaatatgaa 105
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 96 tatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagtaa 147
|||||||||| ||||||| || | |||||||||| |||||||||||||||
Sbjct: 55 tatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaagtaa 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||||||| | ||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttccca 114
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatatgtatat 62
|||||||||||||||| ||| |||| | |||||||||| |||| || |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | |||| ||| | ||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||| ||||||||||| |||||||| | |||||||||| ||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttccca 94
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 63 atatgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| ||||| |||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaat 117
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 65 atgtctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||| |||||
Sbjct: 50 atgtctagattcattaacttctatgtgaat 21
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||||||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005383.3/77876-77739 39947:Oryza sativa Japonica
Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataaga 36
|||||||||||||| |||||||||||||
Sbjct: 136 gctactccctccgtctcataatataaga 109
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataag 35
||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgtctcataatataag 29
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa Japonica
Group
Length = 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 9 gctactccctccgtttcataatataaga 36
|||||||||||||||||| |||||||||
Sbjct: 115 gctactccctccgtttcaaaatataaga 88
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||||| ||||||| || | ||| |||| | ||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
||||||||||| | ||||||| || | |||||||| | ||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 95 atatgaatgtgggtaatgctataacgtcttacattataaaacggaggaagta 146
|||||||| |||| ||||||| || | |||||||| | ||||||||||||||
Sbjct: 91 atatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcattgcccatat 56
|||| ||||||||||| ||| |||| | |||||||||| |||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatat 97
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataaga 36
|||||||||||||| ||||||||||||
Sbjct: 4 ctactccctccgttccataatataaga 30
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 62 tatatgtctagattcattaacatctatatgaatat 96
||||||||||||||||||| |||| |||| |||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatat 47
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| |||||||| | || |||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcatt 102
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacat 84
|||||||||||||| ||||||||||||
Sbjct: 85 tatatatatgtctaaattcattaacat 59
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacat 84
|||||||| |||||||||||||||||
Sbjct: 77 atatatatatctagattcattaacat 102
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tactccctccgtttcataatataagactttctagcatt 48
|||||||||||||||| ||| |||| | ||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatt 119
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| ||| |||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttccca 47
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataaga 36
|||||||||||||| ||||||||||||
Sbjct: 133 ctactccctccgttccataatataaga 107
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||| |||||||||||||||||| | || |||||||
Sbjct: 92 ctactccatccgtttcataatataagtcattttagcatt 54
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 140 ctactccctccgtttcacaatgtaagtcattctagcatt 102
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 11 tactccctccgtttcataatataagactttctagcattgccca 53
|||||||||||||||| |||||||| |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttccca 47
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 14 tccctccgtttcataatataagactttctagcatt 48
||||||||||||| |||||||| | ||||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatt 42
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 ctactccctccgtttcataatataagactttctagcatt 48
||||||||||||||||| ||| |||| | ||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatt 42
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 68 tctagattcattaacatctatatgaat 94
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 52 catatgtatatatatgtctagattcattaacatctatatgaat 94
|||||| || |||||||||||||||| ||||||| ||| ||||
Sbjct: 52 catatggatgtatatgtctagattcactaacatccatacgaat 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 cttacattataaaacggaggaagtaac 148
|||||||||||||||||||| ||||||
Sbjct: 114 cttacattataaaacggagggagtaac 140
