miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
           (barrel medic)
          Length = 104

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 112 aatctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||||
Sbjct: 75  aatctcggaccaggcttcattcccccca 102



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          ||||||||||| |||||||||||||||
Sbjct: 1  gttgagaggaacgttgtctggctcgag 27




>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
          (papaya)
          Length = 125

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||||||||||||||||||||||||
Sbjct: 1  gttgagaggaatgttgtctggctcgag 27



 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||
Sbjct: 98  tctcggaccaggcttcattcccccca 123




>RF00075;mir-166;AARH01003279.1/141842-141699 3694:Populus
          trichocarpa
          Length = 144

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||||||||||||||||||||||||
Sbjct: 1  gttgagaggaatgttgtctggctcgag 27




>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
          Length = 94

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 66  atctcggaccaggcttcattcccccca 92




>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
          Length = 92

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 64  atctcggaccaggcttcattcccccca 90




>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
           (castor bean)
          Length = 94

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 66  atctcggaccaggcttcattcccccca 92




>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
          Length = 157

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||||||||||||||||||||||||
Sbjct: 1  gttgagaggaatgttgtctggctcgag 27



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 tctcggaccaggcttcattcccc 136
           |||||||||||||||||||||||
Sbjct: 130 tctcggaccaggcttcattcccc 152




>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
          Length = 90

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 62  atctcggaccaggcttcattcccccca 88




>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
          Length = 212

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 186 atctcggaccaggcttcattcccccca 212




>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
           (sorghum)
          Length = 191

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 163 atctcggaccaggcttcattcccccca 189




>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 160

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 132 atctcggaccaggcttcattcccccca 158




>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
           Indica Group
          Length = 180

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 152 atctcggaccaggcttcattcccccca 178




>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
           Group
          Length = 179

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 113 atctcggaccaggcttcattcccccca 139
           |||||||||||||||||||||||||||
Sbjct: 151 atctcggaccaggcttcattcccccca 177




>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
           pekinensis
          Length = 87

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||
Sbjct: 60  tctcggaccaggcttcattcccccca 85




>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
           cress)
          Length = 111

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||
Sbjct: 84  tctcggaccaggcttcattcccccca 109



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||||||||| ||||||||||||||
Sbjct: 1  gttgagaggaatattgtctggctcgag 27




>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
           (barrel medic)
          Length = 107

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||
Sbjct: 80  tctcggaccaggcttcattcccccca 105



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
          Length = 93

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||||
Sbjct: 66  tctcggaccaggcttcattcccccca 91




>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
           (barrel medic)
          Length = 92

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 113 atctcggaccaggcttcattccccc 137
           |||||||||||||||||||||||||
Sbjct: 64  atctcggaccaggcttcattccccc 88




>RF00075;mir-166;ABIM01012777.1/4514-4390 3649:Carica papaya
           (papaya)
          Length = 125

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 97  atctcggaccaggcttcattcccc 120




>RF00075;mir-166;ABIM01012128.1/12128-12036 3649:Carica papaya
           (papaya)
          Length = 93

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattcccccca 91




>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
           (papaya)
          Length = 136

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 111 tcggaccaggcttcattcccccca 134



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
           (thale cress)
          Length = 118

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 114 tctcggaccaggcttcattccccc 137
           ||||||||||||||||||||||||
Sbjct: 91  tctcggaccaggcttcattccccc 114



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||||||| ||||||||||||||||
Sbjct: 1  gttgagaggattgttgtctggctcgag 27




>RF00075;mir-166;EU548832.1/235-380 3702:Arabidopsis thaliana (thale
           cress)
          Length = 146

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccccca 144




>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana (thale
           cress)
          Length = 122

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 97  tcggaccaggcttcattcccccca 120




>RF00075;mir-166;AARH01009662.1/134102-134198 3694:Populus
           trichocarpa
          Length = 97

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 114 tctcggaccaggcttcattccccccatc 141
           ||||||||||||||||||||||| ||||
Sbjct: 70  tctcggaccaggcttcattcccctcatc 97




>RF00075;mir-166;AARH01001058.1/130278-130374 3694:Populus
           trichocarpa
          Length = 97

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 72  tcggaccaggcttcattcccccca 95




>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
           trichocarpa
          Length = 134

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 109 tcggaccaggcttcattcccccca 132



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus trichocarpa
          Length = 125

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcccccca 123



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
           trichocarpa
          Length = 155

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 130 tcggaccaggcttcattcccccca 153



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AASG02002547.1/1046-1166 3988:Ricinus communis
           (castor bean)
          Length = 121

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 96  tcggaccaggcttcattcccccca 119



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
           (castor bean)
          Length = 133

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccccca 131



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AASG02007713.1/11405-11313 3988:Ricinus communis
           (castor bean)
          Length = 93

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattcccccca 91




>RF00075;mir-166;CT009488.4/103389-103285 3880:Medicago truncatula
           (barrel medic)
          Length = 105

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 114 tctcggaccaggcttcattccccccatc 141
           ||||||||||||||||||||| ||||||
Sbjct: 78  tctcggaccaggcttcattcctcccatc 105




>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
          Length = 113

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 88  tcggaccaggcttcattcccccca 111



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
          Length = 148

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 123 tcggaccaggcttcattcccccca 146



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 27 gttgagaggaatgttgtctggctcgag 53
          |||||| ||||||||||||||||||||
Sbjct: 1  gttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
           tobacco)
          Length = 185

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 162 tcggaccaggcttcattcccccca 185




>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
          Length = 156

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 131 tcggaccaggcttcattcccccca 154



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
          Length = 150

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 125 tcggaccaggcttcattcccccca 148



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
          Length = 119

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 91  atctcggaccaggcttcattcccc 114




>RF00075;mir-166;EU945393.1/89-202 4577:Zea mays
          Length = 114

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 86  atctcggaccaggcttcattcccc 109




>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
          Length = 97

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 69  atctcggaccaggcttcattcccc 92



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AY501432.1/1-122 4577:Zea mays
          Length = 122

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 96  atctcggaccaggcttcattcccc 119




>RF00075;mir-166;ABXC01000193.1/181030-180913 4558:Sorghum bicolor
           (sorghum)
          Length = 118

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 90  atctcggaccaggcttcattcccc 113




>RF00075;mir-166;ABXC01000715.1/152379-152276 4558:Sorghum bicolor
           (sorghum)
          Length = 104

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 79  tcggaccaggcttcattcccccca 102




>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
           (sorghum)
          Length = 97

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 69  atctcggaccaggcttcattcccc 92



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;AAAA02030332.1/11899-12019 39946:Oryza sativa
           Indica Group
          Length = 121

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 93  atctcggaccaggcttcattcccc 116




>RF00075;mir-166;AAAA02007901.1/15784-15895 39946:Oryza sativa
           Indica Group
          Length = 112

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 tcggaccaggcttcattcccccca 139
           ||||||||||||||||||||||||
Sbjct: 87  tcggaccaggcttcattcccccca 110




>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
           Japonica Group
          Length = 103

 Score = 48.1 bits (24), Expect = 4e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 113 atctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||||
Sbjct: 75  atctcggaccaggcttcattcccc 98



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 ttgagaggaatgttgtctggctcgag 53
          ||||| ||||||||||||||||||||
Sbjct: 2  ttgaggggaatgttgtctggctcgag 27




>RF00075;mir-166;ABIM01018276.1/2199-2062 3649:Carica papaya
           (papaya)
          Length = 138

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 113 atctcggaccaggcttcattccc 135
           |||||||||||||||||||||||
Sbjct: 110 atctcggaccaggcttcattccc 132




>RF00075;mir-166;EU548914.1/298-397 3702:Arabidopsis thaliana (thale
           cress)
          Length = 100

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 tctcggaccaggcttcattcccc 136
           |||||||||||||||||||||||
Sbjct: 73  tctcggaccaggcttcattcccc 95




>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
          Length = 105

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 115 ctcggaccaggcttcattccccc 137
           |||||||||||||||||||||||
Sbjct: 79  ctcggaccaggcttcattccccc 101




>RF00075;mir-166;ABXC01000331.1/255164-255261 4558:Sorghum bicolor
           (sorghum)
          Length = 98

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 tctcggaccaggcttcattcccc 136
           |||||||||||||||||||||||
Sbjct: 71  tctcggaccaggcttcattcccc 93




>RF00075;mir-166;AC027660.2/136704-136618 39947:Oryza sativa
           Japonica Group
          Length = 87

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 tctcggaccaggcttcattcccc 136
           |||||||||||||||||||||||
Sbjct: 60  tctcggaccaggcttcattcccc 82




>RF00075;mir-166;AAAA02029560.1/62131-62045 39946:Oryza sativa
           Indica Group
          Length = 87

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 114 tctcggaccaggcttcattcccc 136
           |||||||||||||||||||||||
Sbjct: 60  tctcggaccaggcttcattcccc 82



 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 27 gttgagaggaatgttgtctggc 48
          ||||||||||||||||||||||
Sbjct: 1  gttgagaggaatgttgtctggc 22




>RF00075;mir-166;DQ908436.1/479-591 3635:Gossypium hirsutum (upland
           cotton)
          Length = 113

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 85  atctcggaccaggcttcattcc 106




>RF00075;mir-166;AARH01005662.1/95261-95577 3694:Populus trichocarpa
          Length = 317

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 289 atctcggaccaggcttcattcc 310




>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
          Length = 88

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 62  ctcggaccaggcttcattcccc 83




>RF00075;mir-166;AARH01007982.1/90633-90310 3694:Populus trichocarpa
          Length = 324

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 296 atctcggaccaggcttcattcc 317




>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
          Length = 94

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 68  ctcggaccaggcttcattcccc 89




>RF00075;mir-166;AASG02003407.1/927-777 3988:Ricinus communis
           (castor bean)
          Length = 151

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 125 ctcggaccaggcttcattcccc 146




>RF00075;mir-166;AC155889.2/42101-41932 3880:Medicago truncatula
           (barrel medic)
          Length = 170

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcc 163




>RF00075;mir-166;AC148816.3/87512-87332 3880:Medicago truncatula
           (barrel medic)
          Length = 181

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 153 atctcggaccaggcttcattcc 174




>RF00075;mir-166;AC235255.1/12904-12739 3847:Glycine max (soybean)
          Length = 166

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 138 atctcggaccaggcttcattcc 159




>RF00075;mir-166;BABK01008352.1/1692-1590 34305:Lotus japonicus
          Length = 103

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 114 tctcggaccaggcttcattccc 135
           ||||||||||||||||||||||
Sbjct: 76  tctcggaccaggcttcattccc 97




>RF00075;mir-166;CAAP02007291.1/14711-14590 29760:Vitis vinifera
          Length = 122

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 94  atctcggaccaggcttcattcc 115




>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
          Length = 150

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 124 ctcggaccaggcttcattcccc 145




>RF00075;mir-166;AY664417.1/307265-307178 4577:Zea mays
          Length = 88

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 114 tctcggaccaggcttcattcccccca 139
           ||||||||||||||||||||| ||||
Sbjct: 61  tctcggaccaggcttcattcctccca 86




>RF00075;mir-166;ABXC01000758.1/126828-126715 4558:Sorghum bicolor
           (sorghum)
          Length = 114

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 88  ctcggaccaggcttcattcccc 109




>RF00075;mir-166;AP008218.1/18370254-18370388 39947:Oryza sativa
           Japonica Group
          Length = 135

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 113 atctcggaccaggcttcattcc 134
           ||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128




>RF00075;mir-166;ABEU01001509.1/37358-37431 145481:Physcomitrella
           patens subsp. patens
          Length = 74

 Score = 44.1 bits (22), Expect = 6e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 ctcggaccaggcttcattcccc 136
           ||||||||||||||||||||||
Sbjct: 48  ctcggaccaggcttcattcccc 69