miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01003678.1/89613-89769 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 aagtactccctccgttccaaat 31
||||||||||||||||||||||
Sbjct: 2 aagtactccctccgttccaaat 23
>RF00906;MIR1122;EU626553.1/80133-80237 4572:Triticum urartu
Length = 105
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 aagtactccctccgttccaaa 30
|||||||||||||||||||||
Sbjct: 2 aagtactccctccgttccaaa 22
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 42.1 bits (21), Expect = 8e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 aagtactccctccgttccaaataaagtga 38
||||||||||||||| |||||| ||||||
Sbjct: 93 aagtactccctccgtcccaaattaagtga 65
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 aagtactccctccgttccaaa 30
|||||||||||||||||||||
Sbjct: 2 aagtactccctccgttccaaa 22
>RF00906;MIR1122;AAAA02002393.1/9285-9146 39946:Oryza sativa
Indica Group
Length = 140
Score = 42.1 bits (21), Expect = 8e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 aagtactccctccgttccaaa 30
|||||||||||||||||||||
Sbjct: 2 aagtactccctccgttccaaa 22
