miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;AASG02007590.1/3624-3708 3988:Ricinus communis
(castor bean)
Length = 85
Score = 52.0 bits (26), Expect = 1e-06
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 11 ttgacagaagagagagagcagaacccgagaaatggtcaaagaatcttttacctttggtgg 70
|||||||||||||||||||| |||||| | || ||||| ||||| |||||| |||
Sbjct: 1 ttgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttgttgg 59
Query: 71 gagtgtgctctctattcttctgtcat 96
||||||||||||| |||||||||||
Sbjct: 60 gagtgtgctctctcctcttctgtcat 85
>RF00073;mir-156;AP008215.1/18234552-18234465 39947:Oryza sativa
Japonica Group
Length = 88
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 tgacagaagagagagagcagaacccg 37
||||||||||||||||||| ||||||
Sbjct: 2 tgacagaagagagagagcacaacccg 27
