miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 198 bits (100), Expect = 2e-50
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| ||||||||||||||||||||||||||| ||| | | ||||||||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
|||| |||||||| ||||||||||||| |||||||||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagta 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
||||||||||| | ||||||| |||| || |||||||||||||| ||||||||||||||
Sbjct: 61 tccgtatgtagacatctagtgaaatcgcttaaaagacttatatttaggaacggagggagt 2
Query: 174 a 174
|
Sbjct: 1 a 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 68
|||| |||||||| |||||||||||||||| || |||||| |||| |||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatac 107
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 174 bits (88), Expect = 3e-43
Identities = 145/164 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| ||||||||||||||||| || |||||| ||| | ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
||||||||||||||||||| | |||||| |||||||||||||||||| |||||||| ||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
|||| || ||||||||||||||||||| |||||||||||||||
Sbjct: 44 agtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
||||||||||||| ||||| | |||||||||||||||||||||| ||||||||||||||
Sbjct: 104 tccgtatgtagtcgtctagcgaaatctctaaaaagacttatatttaggaacggagggagt 163
Query: 174 a 174
|
Sbjct: 164 a 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtctttt 41
|||| |||||||| |||||||||||||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttt 31
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 167 bits (84), Expect = 7e-41
Identities = 145/164 (88%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| |||||| |||||||||| || ||||||||||| || |||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
|||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 63 agcaaaatgagtgaatctgtactctaa-gtatgtctatatacatccgtatgtagtcccct 121
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
|||| || |||||||||||||||||| |||||||||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 136 aatctctaaaaagacttatattatggaacggagggagta 174
|||||||||||||||||| ||| |||||||||||||||
Sbjct: 41 aatctctaaaaagacttacatttaggaacggagggagta 3
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtctttt 41
|||| |||||||| |||||||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttt 135
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 139 bits (70), Expect = 2e-32
Identities = 144/166 (86%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 9 agtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatac 68
|||||| |||| ||| ||||||||||||||||| || |||| || | |||||||||||
Sbjct: 3 agtactccctctgttcctaaatataagtctttttagagatt-ctaatatggactacatac 61
Query: 69 aaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcct 128
|||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 62 ggagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtcc- 120
Query: 129 ctagtggaatctctaaaaagacttatattatggaacggagggagta 174
|| | |||||||||||||||||||||| |||||||||||||||
Sbjct: 121 atattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 58.0 bits (29), Expect = 4e-08
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
|||||||||||||| || | ||||||||||||||||||||||| ||||| ||||||||
Sbjct: 64 tccgtatgtagtcca-tattagaatctctaaaaagacttatatttaggaacagagggagt 6
Query: 174 a 174
|
Sbjct: 5 a 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgattt 50
|||| |||||||| ||||||||||||||||| || |||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagattt 127
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 115 bits (58), Expect = 2e-25
Identities = 141/166 (84%), Gaps = 7/166 (4%)
Strand = Plus / Minus
Query: 10 gtacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacataca 69
||||| |||||||| |||||||||||||| | || |||||| ||| |||||||||||
Sbjct: 162 gtactccctccgttcctaaatataagtctctgtagagatttcactat-ggactacatacg 104
Query: 70 aagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctc 129
||||||||||||||||||||||||||||| | ||||||||| ||||| ||||
Sbjct: 103 aagcaaaatgagtgaatctacactctaaaatgcatctatatac-----tatgtggtcc-a 50
Query: 130 tagtggaatctctaaaaagacttatattatggaacggagggagtaa 175
|||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 49 tagtggaatctctacaaagacttatatttaggaacggagggagtaa 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 116 cgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagta 174
|||||||||||| ||||| |||||||| | ||||||||||| |||||||||||||||
Sbjct: 104 cgtatgtagtcca-tagtgaaatctctacagagacttatatttaggaacggagggagta 161
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttt 40
|||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 111 bits (56), Expect = 3e-24
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 59 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 118
|||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 115 gactacatacggagcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgt 56
Query: 119 atgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagta 174
||||||| | |||| ||||||||||| | |||||||| |||||||||||||||
Sbjct: 55 atgtagt-ttatagtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
||||||||||||| |||||| ||| |||||| | |||||||| |||||||||||||||
Sbjct: 103 tccgtatgtagtctcctagtgaaatacctaaaaggtcttatattttggaacggagggagt 162
Query: 174 a 174
|
Sbjct: 163 a 163
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 111 bits (56), Expect = 3e-24
Identities = 138/164 (84%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| | ||||||||| | ||| || ||||| ||| | ||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||| | |
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt-ttat 48
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
||| ||||||||||| | |||||||| |||||||||||||||
Sbjct: 47 agtacaatctctaaaaggtcttatatttaggaacggagggagta 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
||||||||||||| ||||||| ||| |||||| | |||||||| |||||||||||||||
Sbjct: 106 tccgtatgtagtcttctagtgaaatacctaaaaggtcttatattttggaacggagggagt 165
Query: 174 a 174
|
Sbjct: 166 a 166
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 87.7 bits (44), Expect = 5e-17
Identities = 137/164 (83%), Gaps = 3/164 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| |||||||||||||||| || |||||| ||| || || ||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcactatag-accacatacgg 63
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
|| ||||||||||||||||||| |||| | ||||||||||||||||||| |||| |
Sbjct: 64 agaaaaatgagtgaatctacaca-taaaatgcatctatatacatccgtatgtggtccac- 121
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
|||| ||| |||| |||||||||||| |||||||||||||||
Sbjct: 122 agtgaaatatctacgaagacttatatttaggaacggagggagta 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 130 tagtggaatctctaaaaagacttatattatggaacggagggagta 174
||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 49 tagtgaaatctctccaaagacttatatttaggaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 9 agtacttcctccgtttctaaatataagtctt 39
|||||| |||||||| |||||||||||||||
Sbjct: 167 agtactccctccgttcctaaatataagtctt 137
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 79.8 bits (40), Expect = 1e-14
Identities = 135/164 (82%), Gaps = 2/164 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| |||||||||||||||| | |||||| || |||| ||||||
Sbjct: 2 tactccctccgttcctaaatataagtctttggacagatttcattat-ggaccacatacgg 60
Query: 71 agcaaaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctct 130
|| |||||||||||| ||| |||||||| | |||| |||||||||||||| |||| |
Sbjct: 61 agtaaaatgagtgaacctatactctaaaatgcatctacatacatccgtatgtggtcca-t 119
Query: 131 agtggaatctctaaaaagacttatattatggaacggagggagta 174
|||| |||||||| ||||||||||||| |||| ||||||||||
Sbjct: 120 agtgaaatctctacaaagacttatatttaggaatggagggagta 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 145 aaagacttatattatggaacggagggagta 174
||||||||||||| |||||||||||||||
Sbjct: 31 aaagacttatatttaggaacggagggagta 2
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 79.8 bits (40), Expect = 1e-14
Identities = 98/116 (84%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 59 gactacatacaaagcaaaatgagtgaatctacactctaaagtatgtctatatacatccgt 118
|||||||||| |||||||||||||||| |||| | ||| |||| ||| ||||||||||
Sbjct: 116 gactacatacggagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgt 57
Query: 119 atgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagta 174
||||||| | ||||| |||||||||| | |||||||| |||||||||||||||
Sbjct: 56 atgtagt-ttatagtgagatctctaaaaggtcttatatttaggaacggagggagta 2
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 73.8 bits (37), Expect = 7e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
|||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 64 tccgtatgtagtcca-tagtgtaatctctaaaaagacttatatttaggaacggagggagt 6
Query: 174 a 174
|
Sbjct: 5 a 5
Score = 67.9 bits (34), Expect = 5e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| ||||||||||||||||| || |||| | || | |||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacact-atggactacatacgg 63
Query: 71 agcaaaatgagtgaatct 88
||||||||||||||||||
Sbjct: 64 agcaaaatgagtgaatct 81
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 135 gaatctctaaaaagacttatattatggaacggaggg 170
|||||||||||| |||||||||| |||||||||||
Sbjct: 76 gaatctctaaaaggacttatatttaggaacggaggg 111
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 100 tatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagacttatattat 159
||||||||||||||||||||| |||||| ||| || || ||| |||||||||||||
Sbjct: 79 tatgtctatatacatccgtatatagtccactaatgaaacttctttaaagacttatattta 20
Query: 160 ggaacggagggagta 174
|||||||||||||||
Sbjct: 19 ggaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
||||||||||| | |||||| ||| ||| |||||||||||||| ||||||||||||||
Sbjct: 91 tccgtatgtagactactagtgaaatatcttaaaagacttatatttaggaacggagggagt 150
Query: 174 a 174
|
Sbjct: 151 a 151
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaa 70
|||| |||||||| |||||||||||||||||||| ||||| ||| | ||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92
Query: 71 agcaaaatgagt 82
||||||||||||
Sbjct: 91 agcaaaatgagt 80
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatataagtcttt 40
|||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 65.9 bits (33), Expect = 2e-10
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 94 ctaaagtatgtctatatacatccgtatgtagtcctctagtggaatctctaaaaagactta 153
||||| |||||||||||||||||||||||||| | ||||| ||| |||||| | ||||
Sbjct: 87 ctaaaatatgtctatatacatccgtatgtagttc-atagtgtaatacctaaaaggtctta 145
Query: 154 tattatggaacggagggagta 174
|||| |||||||||||||||
Sbjct: 146 tatttaggaacggagggagta 166
Score = 50.1 bits (25), Expect = 1e-05
Identities = 53/61 (86%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 114 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 173
|||||||||||||| |||| |||| ||||||| | |||||||| ||||||||||||||
Sbjct: 64 tccgtatgtagtcca-tagtagaatttctaaaaggtcttatatttaggaacggagggagt 6
Query: 174 a 174
|
Sbjct: 5 a 5
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 113 atccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggag 172
||||||||||||||| |||| |||||| | ||||||||||||| |||||||||||||
Sbjct: 77 atccgtatgtagtccgttagttgaatctttcgaaagacttatatttaggaacggagggag 136
Query: 173 ta 174
||
Sbjct: 137 ta 138
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatataagtcttt 40
|||| |||||||| ||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||||||||||||||||||| ||||
Sbjct: 80 ctaaaaagtcttatattatggaacggaggaagta 113
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||| |||||| |||||||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF01058;MIR806;AP005184.5/84409-84174 39947:Oryza sativa Japonica
Group
Length = 236
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 26 cttatattatggaacggagggagta 2
>RF01058;MIR806;AP003960.2/91001-90759 39947:Oryza sativa Japonica
Group
Length = 243
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 26 cttatattatggaacggagggagta 2
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggag 172
|||||||||||||||||||||||
Sbjct: 218 cttatattatggaacggagggag 240
>RF00906;MIR1122;AK248893.1/1282-1190 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagta 5
>RF00906;MIR1122;AAAA02012907.1/4650-4807 39946:Oryza sativa Indica
Group
Length = 158
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagta 5
>RF00906;MIR1122;AACV01009198.1/25225-25351 39947:Oryza sativa
Japonica Group
Length = 127
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 29 cttatattatggaacggagggagta 5
>RF00906;MIR1122;AAAA02007333.1/13137-13002 39946:Oryza sativa
Indica Group
Length = 136
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagta 174
|||||||||||||||||||||||||
Sbjct: 108 cttatattatggaacggagggagta 132
>RF00906;MIR1122;AAAA02015085.1/16920-17040 39946:Oryza sativa
Indica Group
Length = 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 139 ctctaaaaagacttatattatggaacggagggagta 174
|||||||| ||||||||||||| ||||||||||||
Sbjct: 40 ctctaaaatcacttatattatgggacggagggagta 5
>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagtaaa 176
||||||| ||||||||| | ||||||||||||||||
Sbjct: 38 ctaaaaatacttatattttagaacggagggagtaaa 3
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 116 cgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagta 174
|||||||||||| ||||| ||||| || ||||||||||||| |||| ||||||||||
Sbjct: 62 cgtatgtagtccg-tagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 152 tatattatggaacggagggagta 174
|||||||||||||||||||||||
Sbjct: 27 tatattatggaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 tatattatggaacggagggagta 174
|||||||||||||||||||||||
Sbjct: 132 tatattatggaacggagggagta 154
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 148 gacttatattatggaacggagggagta 174
|||||||||| ||||||||||||||||
Sbjct: 132 gacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 148 gacttatattatggaacggagggagta 174
|||||||||| ||||||||||||||||
Sbjct: 132 gacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 148 gacttatattatggaacggagggagta 174
||||||||||||| |||||||||||||
Sbjct: 31 gacttatattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 152 tatattatggaacggagggagta 174
|||||||||||||||||||||||
Sbjct: 27 tatattatggaacggagggagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagtaa 175
|||||| |||||||||| || ||||||||||||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagtaa 150
>RF00906;MIR1122;CR855038.1/146938-146783 4530:Oryza sativa (rice)
Length = 156
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaaa 176
|||||||||||| ||||||||||||||
Sbjct: 128 cttatattatgggacggagggagtaaa 154
>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
Japonica Group
Length = 100
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagtaa 175
||||||| ||||||||| ||| |||||||||||||
Sbjct: 63 ctaaaaatacttatattttgggacggagggagtaa 97
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 7 atagtacttcctccgtttctaaatataagtc 37
||||||||||||||||||| ||||||||||
Sbjct: 131 atagtacttcctccgtttcacaatataagtc 101
>RF01058;MIR806;AACV01004667.1/24086-23843 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 243 tacttcctccgtttctaaatat 222
>RF01058;MIR806;AC134046.4/162313-162553 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AP008215.1/16648319-16648080 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 239 tacttcctccgtttctaaatat 218
>RF01058;MIR806;AP005912.3/106817-106576 39947:Oryza sativa Japonica
Group
Length = 242
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||||| |||||||||||
Sbjct: 217 cttatattatggaatggagggagtaa 242
>RF01058;MIR806;ABRL01000391.1/1735-1498 65489:Oryza barthii
Length = 238
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 213 cttatattatgggacggagggagtaa 238
>RF01058;MIR806;AP008210.1/1014134-1014363 39947:Oryza sativa
Japonica Group
Length = 230
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AP002542.2/42530-42757 39947:Oryza sativa Japonica
Group
Length = 228
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AAAA02021833.1/5163-4917 39946:Oryza sativa Indica
Group
Length = 247
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AAAA02007552.1/7379-7618 39946:Oryza sativa Indica
Group
Length = 240
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AP008212.1/22380588-22380348 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 216 cttatattatgggacggagggagtaa 241
>RF01058;MIR806;AAAA02008939.1/5279-5038 39946:Oryza sativa Indica
Group
Length = 242
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AC091665.3/80901-80661 4530:Oryza sativa (rice)
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 2 tacttcctccgtttctaaatat 23
>RF01058;MIR806;AP004560.3/95898-95658 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 216 cttatattatgggacggagggagtaa 241
>RF01058;MIR806;AP008208.1/23667322-23667561 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 239 tacttcctccgtttctaaatat 218
>RF01058;MIR806;AL662981.3/103642-103882 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tacttcctccgtttctaaatat 32
||||||||||||||||||||||
Sbjct: 240 tacttcctccgtttctaaatat 219
>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
(barrel medic)
Length = 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 149 acttatattatggaacggagggagta 174
||||||||| ||||||||||||||||
Sbjct: 30 acttatattttggaacggagggagta 5
>RF00906;MIR1122;EU835198.1/120580-120672 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 65 cttatattatgggacggagggagtaa 90
>RF00906;MIR1122;CT009625.1/19364-19456 37682:Aegilops tauschii
Length = 93
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 65 cttatattatgggacggagggagtaa 90
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 145 aaagacttatattatggaacggagggagta 174
|||| ||||||||||| |||||||||||||
Sbjct: 111 aaagtcttatattatgaaacggagggagta 140
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||| |||||||||| || |||||||||||||
Sbjct: 106 ctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02005262.1/2781-2672 39946:Oryza sativa Indica
Group
Length = 110
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 82 cttatattatgggacggagggagtaa 107
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||| |||||| |||||| |||||||||||||
Sbjct: 103 ctaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 145 aaagacttatattatggaacggagggagta 174
|||| ||||||||||| |||||||||||||
Sbjct: 34 aaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 atagtacttcctccgtttctaaatataagtcttt 40
||||||||||||||||||| ||| |||||||||
Sbjct: 1 atagtacttcctccgtttcataatgtaagtcttt 34
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 7 atagtacttcctccgtttctaaatataagtcttt 40
||||||||||||||||||| ||| |||||||||
Sbjct: 1 atagtacttcctccgtttcataatgtaagtcttt 34
>RF00906;MIR1122;AC124836.2/101751-101630 39947:Oryza sativa
Japonica Group
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 149 acttatattatggaacggagggagta 174
||||||| ||||||||||||||||||
Sbjct: 93 acttataatatggaacggagggagta 118
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||| |||||| |||||| |||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02017235.1/6832-6953 39946:Oryza sativa Indica
Group
Length = 122
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 149 acttatattatggaacggagggagta 174
||||||| ||||||||||||||||||
Sbjct: 30 acttataatatggaacggagggagta 5
>RF00906;MIR1122;AAAA02009816.1/6724-6859 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 atattatggaacggagggagta 174
||||||||||||||||||||||
Sbjct: 111 atattatggaacggagggagta 132
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||||||| || |||||||||||||
Sbjct: 38 ctaaaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
(African rice)
Length = 110
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
||||||| ||||||||| ||| ||||||||||||
Sbjct: 73 ctaaaaatacttatattttgggacggagggagta 106
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||| |||||||||| || |||||||||||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||| ||||||||||||| |||||| ||||||
Sbjct: 58 ctaaaatgacttatattatgaaacggatggagta 91
>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
||||||| ||||||||| ||| ||||||||||||
Sbjct: 38 ctaaaaatacttatattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02018486.1/27307-27424 39946:Oryza sativa
Indica Group
Length = 118
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 29 cttatattatgggacggagggagtaa 4
>RF00906;MIR1122;AP002869.1/81681-81526 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 153 atattatggaacggagggagta 174
||||||||||||||||||||||
Sbjct: 26 atattatggaacggagggagta 5
>RF00906;MIR1122;AP004687.2/98890-98773 39947:Oryza sativa Japonica
Group
Length = 118
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 90 cttatattatgggacggagggagtaa 115
>RF00906;MIR1122;AP002865.1/97444-97566 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 95 cttatattatgggacggagggagtaa 120
>RF00906;MIR1122;AAAA02001357.1/661-786 39946:Oryza sativa Indica
Group
Length = 126
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 153 atattatggaacggagggagta 174
||||||||||||||||||||||
Sbjct: 26 atattatggaacggagggagta 5
>RF00906;MIR1122;AL713936.4/62382-62493 4530:Oryza sativa (rice)
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 149 acttatattatggaacggagggagta 174
||||||||||||| ||||||||||||
Sbjct: 30 acttatattatgggacggagggagta 5
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 145 aaagacttatattatggaacggagggagta 174
||||||||| |||||| |||||||||||||
Sbjct: 54 aaagacttacattatgaaacggagggagta 83
>RF00906;MIR1122;AP004229.3/81940-82079 39947:Oryza sativa Japonica
Group
Length = 140
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 112 cttatattatgggacggagggagtaa 137
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 145 aaagacttatattatggaacggagggagta 174
|||| ||||||||||| |||||||||||||
Sbjct: 129 aaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AC090120.8/86565-86433 4530:Oryza sativa (rice)
Length = 133
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 105 cttatattatgggacggagggagtaa 130
>RF00906;MIR1122;AP004123.3/86345-86268 39947:Oryza sativa Japonica
Group
Length = 78
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 149 acttatattatggaacggagggagta 174
||||||||||||| ||||||||||||
Sbjct: 49 acttatattatgggacggagggagta 74
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||| |||||| |||||||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003940.3/16183-16061 39947:Oryza sativa Japonica
Group
Length = 123
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 150 cttatattatggaacggagggagtaa 175
|||||||||||| |||||||||||||
Sbjct: 95 cttatattatgggacggagggagtaa 120
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
||||||| ||||||||| ||| ||||||||||||
Sbjct: 75 ctaaaaatacttatattttgggacggagggagta 108
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||||||| || |||||||||||||
Sbjct: 121 ctaaaaagtcttatattgtgaaacggagggagta 154
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
||||||| ||||||||| ||| ||||||||||||
Sbjct: 38 ctaaaaatacttatattttgggacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 141 ctaaaaagacttatattatggaacggagggagta 174
|||||||| |||| |||||| |||||||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158