miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
Length = 165
Score = 127 bits (64), Expect = 5e-29
Identities = 140/164 (85%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| ||||||||||||||| |||| ||||||| ||||||| || ||| ||| ||||||
Sbjct: 3 tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62
Query: 66 agcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcct 125
|||||||| || |||| |||| ||| |||||||||||||||||||||| |||| |||
Sbjct: 63 agcaaaatgagtgaatctgtactctaa-gtatgtctatatacatccgtatgtagtcccct 121
Query: 126 agtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||||||| | | ||||||||||||||||||||| |||||||||
Sbjct: 122 agtgaaacttctaaaaagacttatatttaggaacggagggagta 165
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggacta 58
|||| |||||||||||||||||||| ||||||| | ||||||| ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggacta 113
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
Length = 166
Score = 127 bits (64), Expect = 5e-29
Identities = 139/164 (84%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| |||||||||||||||||||| ||||||| ||||||| || | ||||| ||| ||
Sbjct: 164 tactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatacgg 105
Query: 66 agcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcct 125
|||||||| || |||| ||| | ||| |||||||||||||||||| || |||| | ||
Sbjct: 104 agcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtctact 45
Query: 126 agtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||||||| || | ||||||||||||||||||||| |||||||||
Sbjct: 44 agtgaaacctctaaaaagacttatatttaggaacggagggagta 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| ||||||| || |||||||
Sbjct: 1 tactccctccgttcctaaatataagtctttttagaggtttcact 44
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 139 aaaagacttatatttaggaacagagggagta 169
||||||||||||||||||||| |||||||||
Sbjct: 134 aaaagacttatatttaggaacggagggagta 164
>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 165
Score = 87.7 bits (44), Expect = 5e-17
Identities = 134/164 (81%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| |||||||||||||||||||| ||||| | ||||||||| | | ||| ||| ||
Sbjct: 1 tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60
Query: 66 agcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcct 125
|||||||| | ||| | ||| ||| |||||||||||||||||||||| |||| |
Sbjct: 61 agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtccatt 120
Query: 126 agtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||||||| || | |||||||||||||||||||| |||||||||
Sbjct: 121 agtgaaatctctacaaagacttatatttaggaacggagggagta 164
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 124 ctagtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 46 ctagtgaaatcgcttaaaagacttatatttaggaacggagggagta 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| |||| || ||||||||||
Sbjct: 164 tactccctccgttcctaaatataagtctttgtagagatttcact 121
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 79.8 bits (40), Expect = 1e-14
Identities = 134/164 (81%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| |||||||||| ||||||||| | ||||| |||||||| || ||||| ||| ||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104
Query: 66 agcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcct 125
|||||||| || |||| ||||| ||| ||||||||| ||||||||||| |||||| |
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagttt-at 45
Query: 126 agtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||| || || | ||| | ||||||||||||||| |||||||||
Sbjct: 44 agtacaatctctaaaaggtcttatatttaggaacggagggagta 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatt 44
|||| |||||||||||||||||||| | ||||| |||||
Sbjct: 1 tactccctccgttcctaaatataagaccttttagagatt 39
>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 166
Score = 79.8 bits (40), Expect = 1e-14
Identities = 134/164 (81%), Gaps = 1/164 (0%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| |||||||||| ||||||||| | ||||| |||||||| | ||||| ||| ||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107
Query: 66 agcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcct 125
|||||||| ||| |||| ||||| ||| ||||||||| ||||||||||| |||||| |
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagttt-at 48
Query: 126 agtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||| || || | ||| | ||||||||||||||| |||||||||
Sbjct: 47 agtacaatctctaaaaggtcttatatttaggaacggagggagta 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatt 44
|||| |||||||||||||||||||| | ||||| |||||
Sbjct: 4 tactccctccgttcctaaatataagaccttttagagatt 42
>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 155
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 95 tatgtctatatacatccgtatatagtttcctagtgaaaacttttaaaagacttatattta 154
|||||||||||||||||||||||||| ||| ||||| | || |||||||||||||||
Sbjct: 79 tatgtctatatacatccgtatatagtccactaatgaaacttctttaaagacttatattta 20
Query: 155 ggaacagagggagta 169
||||| |||||||||
Sbjct: 19 ggaacggagggagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 124 ctagtgaaaacttttaaaagacttatatttaggaacagagggagta 169
||||||||| | ||||||||||||||||||||||| |||||||||
Sbjct: 106 ctagtgaaatatcttaaaagacttatatttaggaacggagggagta 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| ||||| | | ||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcact 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagccttt 35
|||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgttcctaaatataagtcttt 34
>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 139 aaaagacttatatttaggaacagagggagta 169
|||||||||||||||||||||||||||||||
Sbjct: 35 aaaagacttatatttaggaacagagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 133/165 (80%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 5 gtactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatg 64
||||| |||| ||||||||||||||| ||||||| ||||| | | || |||| ||| |
Sbjct: 4 gtactccctctgttcctaaatataagtctttttagagattctaatatgg-actacatacg 62
Query: 65 gagcaaaataagcaaatccatactttaatgtatgtctatatacatccgtatatagtttcc 124
||||||||| || |||| | ||| ||| || |||||||| ||||||||| |||| |
Sbjct: 63 gagcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtc-ca 121
Query: 125 tagtgaaaacttttaaaagacttatatttaggaacagagggagta 169
|| | ||| || | ||||||||||||||||||||| |||||||||
Sbjct: 122 tattcaaatctctaaaaagacttatatttaggaacggagggagta 166
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagattt 45
|||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagattt 127
>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
Length = 165
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 140 aaagacttatatttaggaacagagggagtaatt 172
|||||||||||||||||||| ||||||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagtaatt 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 4 tgtactacctccgttcctaaatataagcctttttaaagatttcact 49
|||||| |||||||||||||||||||| || | || ||||||||||
Sbjct: 163 tgtactccctccgttcctaaatataagtctctgtagagatttcact 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| |||| || ||||| ||||
Sbjct: 5 tactccctccgttcctaaatataagtctttgtagagattccact 48
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 142 agacttatatttaggaacagagggagta 169
|||||||||||||||||| |||||||||
Sbjct: 134 agacttatatttaggaacggagggagta 161
>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 119
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 5 tactccctccgttcctaaatataagtctttttagagattacact 48
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 139 aaaagacttatatttaggaacagagggagta 169
||||||||||||||||||||| |||||||||
Sbjct: 35 aaaagacttatatttaggaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 cctccgttcctaaatataagcctttttaaagatt 44
|||||||||||||||||||| | ||||| |||||
Sbjct: 110 cctccgttcctaaatataagtccttttagagatt 77
>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
Length = 107
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| ||||| |||||||||||||| |||| |||||||||||||
Sbjct: 5 tactccctcctttcctaaatataagtctttctaaagatttcact 48
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 125 tagtgaaaacttttaaaagacttatatttaggaacagagggagta 169
|||||||| |||| ||||||||||||||||||| |||||||||
Sbjct: 49 tagtgaaatctttagaaagacttatatttaggaaaggagggagta 5
>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
wheat)
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 3 ttgtactacctccgttcctaaatataagcctttttaaagatttcact 49
||||||| ||||| |||||||||||||| |||| || ||||||||||
Sbjct: 166 ttgtactccctccattcctaaatataagtctttgtagagatttcact 120
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 140 aaagacttatatttaggaacagagggagta 169
|||||||||||||||||||| |||||||||
Sbjct: 31 aaagacttatatttaggaacggagggagta 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagccttt 35
|||| |||||||||||||||||||| ||||
Sbjct: 2 tactccctccgttcctaaatataagtcttt 31
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 140 aaagacttatatttaggaacagagggagta 169
||||||||||||||||||| |||||||||
Sbjct: 134 aaagacttatatttaggaatggagggagta 163
>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
subsp. dicoccoides
Length = 167
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 140 aaagacttatatttaggaacagagggagta 169
|||||||||||||||||||| |||||||||
Sbjct: 34 aaagacttatatttaggaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 141 aagacttatatttaggaacagagggagta 169
||||||||||||||||||| |||||||||
Sbjct: 137 aagacttatatttaggaacggagggagta 165
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| |||| | ||||||||||
Sbjct: 5 tactccctccgttcctaaatataagtctttggagagatttcact 48
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 gtactacctccgttcctaaatataag 30
||||| ||||||||||||||||||||
Sbjct: 166 gtactccctccgttcctaaatataag 141
>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 140 aaagacttatatttaggaacagagggagta 169
|||||||||||||||||||| |||||||||
Sbjct: 109 aaagacttatatttaggaacggagggagta 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 123 cctagtgaaaacttttaaaagacttatatttaggaacagagggagta 169
|||||||||| | |||||||||||||||||| | || |||||||||
Sbjct: 51 cctagtgaaatatcttaaaagacttatatttaagtacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatt 44
|||| |||||||||||||||||||| |||| |||||||
Sbjct: 138 tactccctccgttcctaaatataagtctttcgaaagatt 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcactgggggactatatatgg 65
|||| ||||||| | |||||||||| ||||| | | |||||||| || | ||| ||| ||
Sbjct: 5 tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64
Query: 66 agcaaaataa 75
||||||||||
Sbjct: 65 agcaaaataa 74
>RF00906;MIR1122;AACV01021941.1/12785-12674 39947:Oryza sativa
Japonica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagccttttta 38
||||||||||||||| |||||||||| ||||||
Sbjct: 108 tactacctccgttccaaaatataagcattttta 76
>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
Japonica Group
Length = 80
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 145 cttatatttaggaacagagggagta 169
|||||||||||||||||||||||||
Sbjct: 29 cttatatttaggaacagagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 gtactacctccgttcctaaatataag 30
||||| ||||||||||||||||||||
Sbjct: 77 gtactccctccgttcctaaatataag 52
>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 167
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| | ||||| |||| |||||
Sbjct: 2 tactccctccgttcctaaatataagaccttttagagatctcact 45
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 6 tactacctccgttcctaaatataagcctttttaaagatttcact 49
|||| |||||||||||||||||||| | ||||| | ||||||||
Sbjct: 163 tactccctccgttcctaaatataagaccttttacaaatttcact 120
Score = 46.1 bits (23), Expect = 2e-04
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 95 tatgtctatatacatccgtatatagtttcctagtgaaaacttttaaaagacttatattta 154
|||| ||| |||||||||||| |||||| |||||| | || | ||| | ||||||||||
Sbjct: 75 tatgactacatacatccgtatgtagttta-tagtgagatctctaaaaggtcttatattta 17
Query: 155 ggaacagagggagta 169
||||| |||||||||
Sbjct: 16 ggaacggagggagta 2
>RF00906;MIR1122;AP008217.1/6469174-6469304 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 146 ttatatttaggaacagagggagta 169
||||||||||||||||||||||||
Sbjct: 28 ttatatttaggaacagagggagta 5
>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
Length = 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 95 tatgtctatatacatccgtatatagtt 121
||||||||||||||||||||| |||||
Sbjct: 93 tatgtctatatacatccgtatgtagtt 119
>RF00906;MIR1122;AP005546.3/18651-18523 39947:Oryza sativa Japonica
Group
Length = 129
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 145 cttatatttaggaacagagggagtaat 171
|||||||||||| ||||||||||||||
Sbjct: 29 cttatatttagggacagagggagtaat 3
>RF01058;MIR806;AAAA02029566.1/13003-12764 39946:Oryza sativa Indica
Group
Length = 240
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 atatttaggaacagagggagta 169
||||||||||||||||||||||
Sbjct: 218 atatttaggaacagagggagta 239
>RF01058;MIR806;AP008207.1/40026717-40026952 39947:Oryza sativa
Japonica Group
Length = 236
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 148 atatttaggaacagagggagta 169
||||||||||||||||||||||
Sbjct: 23 atatttaggaacagagggagta 2
>RF00906;MIR1122;ABXC01003647.1/157196-157057 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 gacttatatttaggaacagagggagtaatt 172
|||||||| || ||||||||||||||||||
Sbjct: 110 gacttataatttggaacagagggagtaatt 139
>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 ttgtactacctccgttcctaaatata 28
||||||| ||||||||||||||||||
Sbjct: 92 ttgtactccctccgttcctaaatata 67
>RF00906;MIR1122;AK248235.1/1048-956 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 93
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 148 atatttaggaacagagggagta 169
||||||||||||||||||||||
Sbjct: 26 atatttaggaacagagggagta 5
>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagc 31
|||| |||||||||||||||||||||
Sbjct: 5 tactccctccgttcctaaatataagc 30
>RF00906;MIR1122;AP003760.4/5605-5476 39947:Oryza sativa Japonica
Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 tactacctccgttcctaaatataagcctttttaa 39
|||||||||||| || |||||||||| |||||||
Sbjct: 5 tactacctccgtcccaaaatataagcatttttaa 38
>RF00906;MIR1122;AP008217.1/27843705-27843861 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 145 cttatatttaggaacagagggagtaa 170
|||||||||||| |||||||||||||
Sbjct: 29 cttatatttagggacagagggagtaa 4
