miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AF521177.1/76812-76977 4513:Hordeum vulgare
          Length = 166

 Score =  165 bits (83), Expect = 3e-40
 Identities = 110/119 (92%)
 Strand = Plus / Minus

                                                                       
Query: 24  tctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatac 83
           ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||
Sbjct: 166 tctactccctccgttcctaaatataagtctttttagagatttcgctagacgactacatac 107

                                                                      
Query: 84  ggagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtct 142
           |||||||||||| |||||||| | |||||||||||| ||||||||| || |||||||||
Sbjct: 106 ggagcaaaatgagtgaatctatattctaaaatatgtctatatacatccgaatgtagtct 48



 Score = 97.6 bits (49), Expect = 6e-20
 Identities = 58/61 (95%)
 Strand = Plus / Plus

                                                                      
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
          |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct: 1  tactccctccgttcctaaatataagtctttttagaggtttcactagtagactacattcgg 60

           
Query: 86 a 86
          |
Sbjct: 61 a 61



 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 174 tatttaggaacggagggagtag 195
           ||||||||||||||||||||||
Sbjct: 144 tatttaggaacggagggagtag 165




>RF00906;MIR1122;EU545231.1/2974-3138 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 165

 Score =  151 bits (76), Expect = 5e-36
 Identities = 106/116 (91%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||||||||||||||||||| || |||||||||||  | ||||||||||
Sbjct: 1   tactccctccgttcctaaatataagtcttttaagcgatttcactagatgtctacatacgg 60

                                                                   
Query: 86  agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
           |||||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 61  agcaaaatgattgaatgtacactctaaagtatgtctatatacatccgtatgtagtc 116



 Score = 91.7 bits (46), Expect = 4e-18
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                       
Query: 25  ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
           ||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 165 ctactccctccgttcctaaatataagtctttgtagagatttcactaatggactacatacg 106

             
Query: 85  ga 86
           ||
Sbjct: 105 ga 104




>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
          Length = 165

 Score =  149 bits (75), Expect = 2e-35
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||| ||||||||| | ||||||  ||||||||||||||||||||||||
Sbjct: 163 tactccctccgttccaaaatataagaccttttaggtatttcactaggagactacatacgg 104

                                                                  
Query: 86  agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
           |||||||||| |||||||| |||||||||||||| ||| ||||| ||||||||||
Sbjct: 103 agcaaaatgagtgaatctatactctaaaatatgtctatgtacatccgtatgtagt 49



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 26 tactccctccgttcctaaatataagtctttttagagatt 64
          ||||||||||||||||||||||||| | |||||||||||
Sbjct: 1  tactccctccgttcctaaatataagaccttttagagatt 39




>RF00906;MIR1122;AY821693.1/1381-1215 58935:Australopyrum velutinum
          Length = 167

 Score =  135 bits (68), Expect = 3e-31
 Identities = 105/116 (90%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||| |||||||||||||||||||||||||||||  | || | ||||||||||||
Sbjct: 5   tactccctctgttcctaaatataagtctttttagagattctaatatg-gactacatacgg 63

                                                                   
Query: 86  agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
           |||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||
Sbjct: 64  agcaaaatgagtgaatctacactctaaaatacgtctatattcatccgtatgtagtc 119



 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 57/61 (93%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           |||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||
Sbjct: 166 tactccctccgttcctaaatataagtctttttagagatttgaatatg-gactacatacgg 108

            
Query: 86  a 86
           |
Sbjct: 107 a 107




>RF00906;MIR1122;DQ352178.1/5805-5640 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 166

 Score =  133 bits (67), Expect = 1e-30
 Identities = 103/115 (89%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||
Sbjct: 166 tactccctccgttccaaaatataagaccttttaggtatttcactagaagactacatacgg 107

                                                                  
Query: 86  agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
           ||||||||||  ||||||| |||||||||||||| ||| ||||| ||||||||||
Sbjct: 106 agcaaaatgagcgaatctatactctaaaatatgtctatgtacatccgtatgtagt 52



 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                  
Query: 25 ctactccctccgttcctaaatataagtctttttagagatt 64
          |||||||||||||||||||||||||| | |||||||||||
Sbjct: 3  ctactccctccgttcctaaatataagaccttttagagatt 42




>RF00906;MIR1122;AF338431.1/8563-8727 37682:Aegilops tauschii
          Length = 165

 Score =  123 bits (62), Expect = 1e-27
 Identities = 84/90 (93%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           |||||||||||||||||||||||||||| | |||||||||||||| | ||||||||||| 
Sbjct: 161 tactccctccgttcctaaatataagtctctgtagagatttcactatg-gactacatacga 103

                                         
Query: 86  agcaaaatgaatgaatctacactctaaaat 115
           |||||||||| |||||||||||||||||||
Sbjct: 102 agcaaaatgagtgaatctacactctaaaat 73



 Score = 73.8 bits (37), Expect = 9e-13
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                       
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcacta 70
          |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 5  tactccctccgttcctaaatataagtctttgtagagattccacta 49




>RF00906;MIR1122;FJ548567.1/3141-3305 4513:Hordeum vulgare
          Length = 165

 Score =  119 bits (60), Expect = 2e-26
 Identities = 103/116 (88%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           |||||||||||||||||||| |||||||||||||||||||| ||| | | ||||||| ||
Sbjct: 3   tactccctccgttcctaaatgtaagtctttttagagatttctctaaggggctacatatgg 62

                                                                   
Query: 86  agcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
           |||||||||| |||||||  ||||| || ||||| ||||||||| |||||||||||
Sbjct: 63  agcaaaatgagtgaatctgtactct-aagtatgtctatatacatccgtatgtagtc 117



 Score = 97.6 bits (49), Expect = 6e-20
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||
Sbjct: 165 tactccctccgttcctaaatataagtctttttagaagtttcactaggggactacatacgg 106

            
Query: 86  a 86
           |
Sbjct: 105 a 105




>RF00906;MIR1122;AK252971.1/1469-1351 112509:Hordeum vulgare subsp.
           vulgare (domesticated barley)
          Length = 119

 Score =  115 bits (58), Expect = 3e-25
 Identities = 74/78 (94%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 5   tactccctccgttcctaaatataagtctttttagagattacactatg-gactacatacgg 63

                             
Query: 86  agcaaaatgaatgaatct 103
           |||||||||| |||||||
Sbjct: 64  agcaaaatgagtgaatct 81



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 30  ccctccgttcctaaatataagtctttttagagatt 64
           ||||||||||||||||||||||| |||||||||||
Sbjct: 111 ccctccgttcctaaatataagtccttttagagatt 77




>RF00906;MIR1122;EU812563.1/51726-51572 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 155

 Score =  107 bits (54), Expect = 6e-23
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||
Sbjct: 151 tactccctccgttcctaaatataagtcttttaagatatttcactagtagtctacatacgg 92

                     
Query: 86  agcaaaatga 95
           ||||||||||
Sbjct: 91  agcaaaatga 82



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 26 tactccctccgttcctaaatataagtcttt 55
          ||||||||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataagtcttt 34




>RF00906;MIR1122;AY013246.1/66605-66771 112509:Hordeum vulgare
           subsp. vulgare (domesticated barley)
          Length = 167

 Score =  103 bits (52), Expect = 1e-21
 Identities = 101/116 (87%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                       
Query: 25  ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
           |||||||||||||||||||||||||| | ||||| | |||||||||  ||||||||||||
Sbjct: 164 ctactccctccgttcctaaatataagaccttttacaaatttcactat-agactacatacg 106

                                                                   
Query: 85  gagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
           ||||||||||| ||||| ||||  | ||||||||  || |||||| ||||||||||
Sbjct: 105 gagcaaaatgagtgaatttacatcccaaaatatgactacatacatccgtatgtagt 50



 Score = 67.9 bits (34), Expect = 6e-11
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                        
Query: 25 ctactccctccgttcctaaatataagtctttttagagatttcacta 70
          |||||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 1  ctactccctccgttcctaaatataagaccttttagagatctcacta 46



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 174 tatttaggaacggagggagtagt 196
           |||||||||||||||||||||||
Sbjct: 143 tatttaggaacggagggagtagt 165




>RF00906;MIR1122;DQ871219.1/152084-152250 85692:Triticum turgidum
           subsp. dicoccoides
          Length = 167

 Score =  101 bits (51), Expect = 4e-21
 Identities = 76/83 (91%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 25  ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
           |||||||||||||||||||||||||||||||  |||||||||||||  |||| |||||||
Sbjct: 4   ctactccctccgttcctaaatataagtctttggagagatttcacta-tagaccacatacg 62

                                  
Query: 85  gagcaaaatgaatgaatctacac 107
           ||| ||||||| |||||||||||
Sbjct: 63  gagaaaaatgagtgaatctacac 85



 Score = 63.9 bits (32), Expect = 9e-10
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcact 69
           |||||||||||||||||||||||||||||  |||| ||||||||
Sbjct: 165 tactccctccgttcctaaatataagtcttcgtagatatttcact 122



 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 174 tatttaggaacggagggagtagt 196
           |||||||||||||||||||||||
Sbjct: 25  tatttaggaacggagggagtagt 3




>RF00906;MIR1122;AY853252.1/232318-232152 4513:Hordeum vulgare
          Length = 167

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 100/116 (86%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 25  ctactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacg 84
           |||||||||||||||||||||||||| | ||||||| |||  |||| | |||||||||||
Sbjct: 4   ctactccctccgttcctaaatataagaccttttagaaattctactatg-gactacatacg 62

                                                                   
Query: 85  gagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagt 140
           || |||||  ||| || ||| || ||||||||||| ||||||||| ||||||||||
Sbjct: 63  gaacaaaacaaataaacctataccctaaaatatgtctatatacatccgtatgtagt 118



 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||||||||||||| | ||||||  ||| ||||| || |||||||||||
Sbjct: 166 tactccctccgttcctaaatataagaccttttaggtattacactatga-actacatacgg 108

            
Query: 86  a 86
           |
Sbjct: 107 a 107



 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 174 tatttaggaacggagggagtagtt 197
           ||||||||||||||||||||||||
Sbjct: 25  tatttaggaacggagggagtagtt 2




>RF00906;MIR1122;AK248896.1/138-279 112509:Hordeum vulgare subsp.
          vulgare (domesticated barley)
          Length = 142

 Score = 87.7 bits (44), Expect = 6e-17
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 26 tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
          |||||||||||| | |||||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 5  tactccctccgtacttaaatataagtcttttaagatatttcactaggtgtctacatacgg 64

                  
Query: 86 agcaaaat 93
          ||||||||
Sbjct: 65 agcaaaat 72



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 26  tactccctccgttcctaaatataagtcttt 55
           ||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgttcctaaatataagtcttt 109




>RF00906;MIR1122;AJ400714.1/2947-2781 4565:Triticum aestivum (bread
           wheat)
          Length = 167

 Score = 83.8 bits (42), Expect = 9e-16
 Identities = 79/90 (87%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           ||||||||||||||||||||||||||||||  | |||||||| || | ||| ||||||||
Sbjct: 2   tactccctccgttcctaaatataagtctttggacagatttcattatg-gaccacatacgg 60

                                         
Query: 86  agcaaaatgaatgaatctacactctaaaat 115
           || ||||||| |||| ||| ||||||||||
Sbjct: 61  agtaaaatgagtgaacctatactctaaaat 90



 Score = 73.8 bits (37), Expect = 9e-13
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcacta 70
           |||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 163 tactccctccattcctaaatataagtctttgtagagatttcacta 119




>RF00906;MIR1122;FM164415.1/16902-16796 4513:Hordeum vulgare
          Length = 107

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 68/76 (89%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                       
Query: 26  tactccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgg 85
           |||||||||| ||||||||||||||||||| || ||||||||||| | ||||||||||| 
Sbjct: 5   tactccctcctttcctaaatataagtctttctaaagatttcactacg-gactacatacga 63

                           
Query: 86  agcaaaatgaatgaat 101
           ||  ||||||||||||
Sbjct: 64  agtgaaatgaatgaat 79




>RF00906;MIR1122;AACV01003934.1/29289-29133 39947:Oryza sativa
          Japonica Group
          Length = 157

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||||||||||||||||
Sbjct: 4  ctactccctccgttcctaaatataag 29



 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 174 tatttaggaacggagggagtag 195
           ||||||||||||||||||||||
Sbjct: 25  tatttaggaacggagggagtag 4




>RF00906;MIR1122;EU730896.1/84586-84679 15368:Brachypodium
           distachyon
          Length = 94

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 171 aagtatttaggaacggagggagtag 195
           |||||||||||||||||||||||||
Sbjct: 67  aagtatttaggaacggagggagtag 91



 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 22 cttctactccctccgttcctaaata 46
          |||||||||||||||||||||||||
Sbjct: 94 cttctactccctccgttcctaaata 70




>RF00906;MIR1122;AAAA02006463.1/56610-56765 39946:Oryza sativa
          Indica Group
          Length = 156

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 22 cttctactccctccgttcctaaatataag 50
          |||||||||||||||| ||||||||||||
Sbjct: 1  cttctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AC129718.2/26799-26917 39947:Oryza sativa
          Japonica Group
          Length = 119

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 26 tactccctccgttcctaaatataag 50
          |||||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatataag 29




>RF00906;MIR1122;AP008214.1/20360044-20360123 39947:Oryza sativa
          Japonica Group
          Length = 80

 Score = 50.1 bits (25), Expect = 1e-05
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 26 tactccctccgttcctaaatataag 50
          |||||||||||||||||||||||||
Sbjct: 76 tactccctccgttcctaaatataag 52




>RF00906;MIR1122;DQ537335.1/79725-79622 4565:Triticum aestivum
           (bread wheat)
          Length = 104

 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 171 aagtatttaggaacggagggagta 194
           ||||||||||||||||||||||||
Sbjct: 77  aagtatttaggaacggagggagta 100




>RF00906;MIR1122;EU730901.1/155966-155873 15368:Brachypodium
           distachyon
          Length = 94

 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 171 aagtatttaggaacggagggagta 194
           ||||||||||||||||||||||||
Sbjct: 28  aagtatttaggaacggagggagta 5




>RF00906;MIR1122;EU730899.1/47735-47828 15368:Brachypodium
           distachyon
          Length = 94

 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 171 aagtatttaggaacggagggagta 194
           ||||||||||||||||||||||||
Sbjct: 67  aagtatttaggaacggagggagta 90




>RF00906;MIR1122;AP008207.1/21121800-21121682 39947:Oryza sativa
           Japonica Group
          Length = 119

 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 26  tactccctccgttcctaaatataa 49
           ||||||||||||||||||||||||
Sbjct: 115 tactccctccgttcctaaatataa 92




>RF00906;MIR1122;AP008207.1/42091247-42091146 39947:Oryza sativa
          Japonica Group
          Length = 102

 Score = 48.1 bits (24), Expect = 5e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 27 actccctccgttcctaaatataag 50
          ||||||||||||||||||||||||
Sbjct: 6  actccctccgttcctaaatataag 29




>RF00906;MIR1122;AC166046.15/79888-79744 3880:Medicago truncatula
          (barrel medic)
          Length = 145

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 25 ctactccctccgttcctaaatataagt 51
          |||||||||||||||| ||||||||||
Sbjct: 4  ctactccctccgttccaaaatataagt 30




>RF00906;MIR1122;FJ188379.1/3521-3613 4513:Hordeum vulgare
          Length = 93

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 26 tactccctccgttcctaaatata 48
          |||||||||||||||||||||||
Sbjct: 89 tactccctccgttcctaaatata 67




>RF00906;MIR1122;AACV01007836.1/7963-7867 39947:Oryza sativa
          Japonica Group
          Length = 97

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 24 tctactccctccgttcctaaatataag 50
          |||||||||||||| ||||||||||||
Sbjct: 95 tctactccctccgtccctaaatataag 69




>RF00906;MIR1122;AACV01005168.1/9233-9388 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 24 tctactccctccgttcctaaatataag 50
          |||||||||||||| ||||||||||||
Sbjct: 3  tctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AP004178.3/74526-74681 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 24 tctactccctccgttcctaaatataag 50
          |||||||||||||| ||||||||||||
Sbjct: 3  tctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AAAA02021208.1/38295-38158 39946:Oryza sativa
          Indica Group
          Length = 138

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 tactccctccgttcctaaatata 48
          |||||||||||||||||||||||
Sbjct: 5  tactccctccgttcctaaatata 27




>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
           Japonica Group
          Length = 157

 Score = 46.1 bits (23), Expect = 2e-04
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 24  tctactccctccgttcctaaatataag 50
           |||||||||||||| ||||||||||||
Sbjct: 155 tctactccctccgtccctaaatataag 129




>RF01058;MIR806;AAAA02008217.1/23513-23265 39946:Oryza sativa Indica
           Group
          Length = 249

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 26  tactccctccgttcctaaatat 47
           ||||||||||||||||||||||
Sbjct: 248 tactccctccgttcctaaatat 227




>RF01058;MIR806;AAAA02022644.1/912-689 39946:Oryza sativa Indica
          Group
          Length = 224

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tactccctccgttcctaaatat 47
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AP008208.1/25882787-25882549 39947:Oryza sativa
           Japonica Group
          Length = 239

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 26  tactccctccgttcctaaatat 47
           ||||||||||||||||||||||
Sbjct: 238 tactccctccgttcctaaatat 217




>RF01058;MIR806;AAAA02011684.1/6693-6933 39946:Oryza sativa Indica
          Group
          Length = 241

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tactccctccgttcctaaatat 47
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AACV01015094.1/17201-16961 39947:Oryza sativa
           Japonica Group
          Length = 241

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 26  tactccctccgttcctaaatat 47
           ||||||||||||||||||||||
Sbjct: 240 tactccctccgttcctaaatat 219




>RF01058;MIR806;AP003629.3/52570-52813 39947:Oryza sativa Japonica
           Group
          Length = 244

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 169 tgaagtatttaggaacggagggagta 194
           |||| |||||||||||||||||||||
Sbjct: 27  tgaaatatttaggaacggagggagta 2



 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tactccctccgttcctaaatat 47
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AP008209.1/22697310-22697556 39947:Oryza sativa
          Japonica Group
          Length = 247

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tactccctccgttcctaaatat 47
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF01058;MIR806;AL606588.4/129622-129859 4530:Oryza sativa (rice)
          Length = 238

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tactccctccgttcctaaatat 47
          ||||||||||||||||||||||
Sbjct: 2  tactccctccgttcctaaatat 23




>RF00906;MIR1122;EU282260.1/1308-1219 97361:Hordeum murinum
          Length = 90

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 171 aagtatttaggaacggagggagtagt 196
           |||||||||||||| |||||||||||
Sbjct: 28  aagtatttaggaacagagggagtagt 3




>RF00906;MIR1122;AC135958.2/60124-60233 39947:Oryza sativa Japonica
           Group
          Length = 110

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  ctactccctccgttcctaaatataag 50
           ||||||||||||| ||||||||||||
Sbjct: 107 ctactccctccgtccctaaatataag 82




>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
           Japonica Group
          Length = 156

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  ctactccctccgttcctaaatataag 50
           ||||||||||||| ||||||||||||
Sbjct: 153 ctactccctccgtccctaaatataag 128




>RF00906;MIR1122;AAAA02028211.1/1243-1359 39946:Oryza sativa
          Indica Group
          Length = 117

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AK288631.1/1276-1390 39947:Oryza sativa Japonica
           Group
          Length = 115

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  ctactccctccgttcctaaatataag 50
           ||||||||||||| ||||||||||||
Sbjct: 112 ctactccctccgtccctaaatataag 87




>RF00906;MIR1122;AC136448.2/118247-118097 39947:Oryza sativa
          Japonica Group
          Length = 151

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AC210491.1/95749-95858 4538:Oryza glaberrima
           (African rice)
          Length = 110

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 26  tactccctccgttcctaaatataagtctttttag 59
           |||||||||||| || |||||||||| |||||||
Sbjct: 106 tactccctccgtcccaaaatataagtatttttag 73




>RF00906;MIR1122;AACV01023423.1/18495-18379 39947:Oryza sativa
          Japonica Group
          Length = 117

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AP004994.2/69469-69314 39947:Oryza sativa
          Japonica Group
          Length = 156

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AACV01023551.1/12075-12186 39947:Oryza sativa
          Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 26 tactccctccgttcctaaatataagtctttttag 59
          |||||||||||| || |||||||||| |||||||
Sbjct: 5  tactccctccgtcccaaaatataagtatttttag 38




>RF00906;MIR1122;AAAA02026408.1/56455-56566 39946:Oryza sativa
          Indica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 26 tactccctccgttcctaaatataagtctttttag 59
          ||||||||||||||  |||||||||| |||||||
Sbjct: 5  tactccctccgttctaaaatataagtatttttag 38




>RF00906;MIR1122;AC120985.3/48011-47950 39947:Oryza sativa
          Japonica Group
          Length = 62

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 59 ctactccctccgtccctaaatataag 34




>RF00906;MIR1122;AP003258.3/44726-44846 39947:Oryza sativa
          Japonica Group
          Length = 121

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||| ||||||||||||||||||||
Sbjct: 4  ctacttcctccgttcctaaatataag 29




>RF00906;MIR1122;AAAA02028032.1/2328-2217 39946:Oryza sativa Indica
           Group
          Length = 112

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 22  cttctactccctccgttcctaaatataagtctttttag 59
           |||||||||||||||| || |||||||||  |||||||
Sbjct: 112 cttctactccctccgtcccaaaatataagcatttttag 75




>RF00906;MIR1122;AC068951.18/128543-128410 39947:Oryza sativa
           Japonica Group
          Length = 134

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tactccctccgttcctaaatataagt 51
           |||||||||||| |||||||||||||
Sbjct: 130 tactccctccgtccctaaatataagt 105




>RF00906;MIR1122;AAAA02018670.1/1486-1331 39946:Oryza sativa
          Indica Group
          Length = 156

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AAAA02019543.1/35421-35577 39946:Oryza sativa
           Indica Group
          Length = 157

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  ctactccctccgttcctaaatataag 50
           ||||||||||||| ||||||||||||
Sbjct: 154 ctactccctccgtccctaaatataag 129




>RF00906;MIR1122;AAAA02004235.1/78774-78625 39946:Oryza sativa
           Indica Group
          Length = 150

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tactccctccgttcctaaatataagt 51
           ||||| ||||||||||||||||||||
Sbjct: 146 tactcactccgttcctaaatataagt 121




>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
           Japonica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 26  tactccctccgttcctaaatataagtctttttag 59
           |||||||||||| || |||||||||| |||||||
Sbjct: 108 tactccctccgtcccaaaatataagtatttttag 75




>RF00906;MIR1122;AACV01012007.1/47065-46909 39947:Oryza sativa
          Japonica Group
          Length = 157

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 ctactccctccgttcctaaatataag 50
          ||||||||||||| ||||||||||||
Sbjct: 4  ctactccctccgtccctaaatataag 29




>RF00906;MIR1122;AP008208.1/1673372-1673471 39947:Oryza sativa
          Japonica Group
          Length = 100

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 26 tactccctccgttcctaaatataagtctttttag 59
          |||||||||||| || |||||||||| |||||||
Sbjct: 96 tactccctccgtcccaaaatataagtatttttag 63




>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
          Indica Group
          Length = 112

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 26 tactccctccgttcctaaatataagtctttttag 59
          |||||||||||| || |||||||||| |||||||
Sbjct: 5  tactccctccgtcccaaaatataagtatttttag 38




>RF00906;MIR1122;AP004736.2/17089-17220 39947:Oryza sativa Japonica
           Group
          Length = 132

 Score = 44.1 bits (22), Expect = 8e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 25  ctactccctccgttcctaaatataag 50
           ||||||||||||| ||||||||||||
Sbjct: 129 ctactccctccgtccctaaatataag 104