miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 123 bits (62), Expect = 6e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagctagt 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| |||| ||||||||||| ||||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggga 98
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 123 bits (62), Expect = 6e-28
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||| ||||| |||| ||||||| ||||||||||
Sbjct: 65 acaatgttgagacagttattttgagacagaggga 98
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 119 bits (60), Expect = 9e-27
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 9 atgctactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaac 68
||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| | |
Sbjct: 1 atgctactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatc 60
Query: 69 tagtacaaagttgaaacagatattttgggacagagg 104
|| ||||||||||| |||| ||||||||||| ||||
Sbjct: 61 taatacaaagttgagacagttattttgggacggagg 96
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 115 bits (58), Expect = 1e-25
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 17 ccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagtacaa 76
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 9 ccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagctagtacaa 68
Query: 77 agttgaaacagatattttgggacagaggga 106
|||| | |||||||||||||||| ||||||
Sbjct: 69 agttaagacagatattttgggacggaggga 98
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| |||||||||||||||| || ||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 73 acaaagttgaaacagatattttgggacagagggaatatt 111
| |||||||| |||| ||||||||||| |||||| ||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 3e-23
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 5 tactctctccgttttaaaataagtgtcttaagcttagtataattttatactagagctaga 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||| | ||| ||||||||||| ||||||
Sbjct: 65 acaaagttaagacaattattttgggacggaggga 98
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 101 bits (51), Expect = 2e-21
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| |||||||||||||||| || |||||| |||| |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 73 acaaagttgaaacagatattttgggacagagggaatatt 111
| |||||||| |||| ||||||||||| |||||| ||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagtatt 103
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 93.7 bits (47), Expect = 5e-19
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||| || |||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagttagt 64
Query: 73 acaaagttgaaacagatattttgggacagagggaatatt 111
|||||| ||| ||| ||||||||||| |||||| ||||
Sbjct: 65 acaaag-tgagacacttattttgggacggagggagtatt 102
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 93.7 bits (47), Expect = 5e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 28 aaaataagtgtcttaagcttagtacaattttatactagaactagtacaaagttgaaacag 87
||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||||
Sbjct: 20 aaaataagtgtcttaagcttagtacaactttgtactagagctaatacaaagttgagacag 79
Query: 88 atattttgggacagaggga 106
||||||| ||| ||||||
Sbjct: 80 ttattttgagacggaggga 98
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||| ||||||||| |||||| ||||| | |||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| ||| ||||||||||| ||||||
Sbjct: 65 acaaagttgagacacttattttgggacggaggga 98
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| ||||||||||||||| ||||||||| || ||| ||||||| ||||
Sbjct: 5 tactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatagt 64
Query: 73 acaaagttgaaacagatattttggga 98
|||||||||| ||| ||||||||||
Sbjct: 65 acaaagttgagacacttattttggga 90
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 83.8 bits (42), Expect = 5e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||| |||||| |||||||| ||||| |||| |||||||| ||| |||||||||||||
Sbjct: 5 tactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactagt 64
Query: 73 acaaagttgaaacagatattttggga 98
|||||||||| ||| ||||||||||
Sbjct: 65 acaaagttgagacacttattttggga 90
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| |||||||| ||||||| || |||||| || | |||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||| | |||| |||||||| |||||||||
Sbjct: 41 acaaagttaagacagttattttggaacagaggga 8
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 83.8 bits (42), Expect = 5e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| ||||||||| ||||| || ||| |||||| ||| ||||||| |||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaa-ctttgtacaactttgtactagagctagt 63
Query: 73 acaaagttgaaacagatattttggga 98
|||||||||| |||| ||||||||||
Sbjct: 64 acaaagttgagacagttattttggga 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 71 gtacaaagttgaaacagatattttgggacagagggaatatta 112
|||||||||||| |||| ||||||| ||| |||||| |||||
Sbjct: 43 gtacaaagttgagacagttattttgagacggagggagtatta 2
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||||||||||| |||||||| | ||| ||||||||||||| ||| ||||||| |||||
Sbjct: 101 tactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctagt 42
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
||||| |||| ||| |||||||| || ||||||
Sbjct: 41 acaaatttgagacacttattttggaacggaggga 8
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtct 40
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||| | ||||||||| ||||| ||||||||||||| ||| || |||| |||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagctagt 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| ||| |||||||| | |||||||
Sbjct: 65 acaaagttgagacacttattttggaagagaggga 98
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||| ||||||||||||| ||| ||||| | || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagttaat 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| ||| ||||||||||| ||||||
Sbjct: 65 acaaagttgagacatttattttgggacggaggga 98
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| ||||||||||||||| |||| |||||||| ||| ||||| | ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||| | ||| ||||||||||| ||||||
Sbjct: 65 acaaagttaagacacttattttgggacggaggga 98
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaa 43
|||||||||||| |||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaa 71
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 77.8 bits (39), Expect = 3e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||| ||||||||||| ||| | | ||||||||||| ||| ||||||| |||||
Sbjct: 5 tactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctagt 64
Query: 73 acaaagttgaaacagatattttg 95
|||||||||| ||| |||||||
Sbjct: 65 acaaagttgagacatttattttg 87
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgtttcaaaataagtgtct 40
||||||||||||||||||||||| |||||
Sbjct: 102 ctactccctccgtttcaaaataaatgtct 74
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||| ||||||||||||| || ||||| | || |
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagttaat 64
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| ||| ||||||||||| ||||||
Sbjct: 65 acaaagttgagacatttattttgggacggaggga 98
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||||||||| || |||||||||| ||| ||||||| ||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagttagt 42
Query: 73 acaaagttgaaacagatattttgggac 99
||| |||| ||| |||||||||||
Sbjct: 41 gtaaaattgagacacttattttgggac 15
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| ||||| || |||| ||||| ||| ||||| | |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 73 acaaagttgaaacagatattttgggac 99
| |||||||| ||| |||||||||||
Sbjct: 41 ataaagttgagacacttattttgggac 15
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 60.0 bits (30), Expect = 7e-09
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
||||| |||| | ||||||||||||||| || |||||||| ||| || || | |||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaactctagtacaactttgtattaaagctagt 42
Query: 73 acaaagttgaaacagatattttgggacagaggga 106
|||||||||| ||| ||||||||||| ||||||
Sbjct: 41 acaaagttgagacacttattttgggacggaggga 8
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 60.0 bits (30), Expect = 7e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| | ||| || |||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 73 acaaagttga 82
||||||||
Sbjct: 65 gtaaagttga 74
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 58.0 bits (29), Expect = 3e-08
Identities = 78/93 (83%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagctt-agtacaattttatactagaactag 71
|||||||||||||||||||||| ||| |||| ||| | |||||||||||||| || ||
Sbjct: 5 tactccctccgtttcaaaataactgttttaaacttaaatacaattttatactgaaattaa 64
Query: 72 tacaaagttgaaacagatattttgggacagagg 104
|| |||||| | |||| ||||||| ||| ||||
Sbjct: 65 tataaagttaagacagttattttgagacggagg 97
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||||||||| |||||||| | ||| || |||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 35 gtgtcttaagcttagtacaattttatactagaactagtacaaagttgaaacagatatttt 94
||||||| |||||||||||| ||| ||||| | |||||||||||||| ||| ||||||
Sbjct: 34 gtgtcttgagcttagtacaactttgtactaaagttagtacaaagttgagacacttatttt 93
Query: 95 ggga 98
||||
Sbjct: 94 ggga 97
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagta 51
|||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagta 62
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaa 43
|||||||||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaa 35
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 45 cttagtacaattttatactagaactagtacaaagttgaaacagatattttgggacagagg 104
|||||||||| ||| ||||| | ||||||||| |||| |||| ||||||||||| ||||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 105 ga 106
||
Sbjct: 145 ga 146
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 27 caaaataagtgtcttaagcttagtacaattttatactagaactagtacaaagttga 82
|||||||||||||| || |||||||||| ||| |||| | ||||||||||||||
Sbjct: 19 caaaataagtgtctcaaccttagtacaactttgcactaaatttagtacaaagttga 74
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtcttaagcttagtacaattttatactagaactagt 72
|||||| |||||| ||||||||||||| || ||||||| || ||||||||| | ||| |
Sbjct: 5 tactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagctaat 64
Query: 73 acaaagttgaaacagatattttggga 98
||||| || | ||| ||||||||||
Sbjct: 65 acaaaattaacacacttattttggga 90
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgtttcaaaataagtgtct 40
||||||||||||| ||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtct 103
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 27 caaaataagtgtcttaagcttagtacaattttatactagaactagtacaaagttgaaaca 86
|||||||| | ||| || |||||||||| ||||||||||| |||| |||||||| |||
Sbjct: 87 caaaataactttctcaaacttagtacaactttatactagagctagggtaaagttgagaca 28
Query: 87 gatattttgggacagaggga 106
||||||| ||| ||||||
Sbjct: 27 cctattttgagacggaggga 8
>RF00906;MIR1122;AC136219.2/91733-91617 39947:Oryza sativa Japonica
Group
Length = 117
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 tgctactccctccgtttcaaaata 33
||||||||||||||||||||||||
Sbjct: 116 tgctactccctccgtttcaaaata 93
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tactccctccgtttcaaaataagtgtc 39
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtatcaaaataagtgtc 31
>RF01058;MIR806;AACV01024998.1/37983-37736 39947:Oryza sativa
Japonica Group
Length = 248
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgtttcaaaata 33
||||||||||||||||||||||
Sbjct: 1 ctactccctccgtttcaaaata 22
>RF01058;MIR806;AACV01015168.1/5798-6045 39947:Oryza sativa Japonica
Group
Length = 248
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgtttcaaaata 33
||||||||||||||||||||||
Sbjct: 248 ctactccctccgtttcaaaata 227
>RF00906;MIR1122;AC147498.15/3925-4071 3880:Medicago truncatula
(barrel medic)
Length = 147
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgtttcaaaata 33
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcaaaata 25
>RF00906;MIR1122;AC153121.15/95512-95668 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgtttcaaaata 33
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtttcaaaata 133
>RF00906;MIR1122;AC166744.12/81328-81484 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgtttcaaaata 33
||||||||||||||||||||||
Sbjct: 154 ctactccctccgtttcaaaata 133
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 69 tagtacaaagttgaaacagatattttgggacagaggga 106
|||||||||||||| || ||||||||||||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacagaggga 8
>RF00906;MIR1122;EU730902.1/34362-34465 15368:Brachypodium
distachyon
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 tgctactccctccgtttcaaaataagtgtc 39
|||||||||||||| |||| ||||||||||
Sbjct: 2 tgctactccctccgattcataataagtgtc 31
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 12 ctactccctccgtttcaaaataagtg 37
|||||||||||||| |||||||||||
Sbjct: 86 ctactccctccgttccaaaataagtg 61
