miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: AAATTGACTCTAGTAGGGAG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant AAATTGACTCTAGTAGGGAG CCCTAATGGGGTCAGATTGA up 2 0


Secondary structure

TGAGTAGTGCTTATGTGGTTCAAATTGACTCTAGTAGGGAGTCCTTATATTTAATGTGACTCCCTAATGGGGTCAGATTGAAACGCTGCAGCCATAATC
---------------------AAATTGACTCTAGTAGGGAGTC 	2
---------------------AAATTGACTCTAGTAGGGAGT 	108
---------------------AAATTGACTCTAGTAGGGAG 	139
---------------------AAATTGACTCTAGTAGGGA 	14
----------------------AATTGACTCTAGTAGGGAGT 	4
----------------------AATTGACTCTAGTAGGGAG 	8
-----------------------------------------------------------CTCCCTAATGGGGTCAGATTGA 	1
-----------------------------------------------------------CTCCCTAATGGGGTCAGATTG 	1

Overlaps with: MNEST035089
Overlaps with miRBase pre-miRNAs: api-mir-929
HuntMi prediction: true miRNA