miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: CTAAGTACTAGTGCCGCGGGAG

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant CTAAGTACTAGTGCCGCGGGAG CCTGCAGCTCAAGTGCTTATCA up 5 0


Secondary structure

ACAATAACGCATATTCTGTTCCTAAGTACTAGTGCCGCGGGAGTGATATCCGTTTTTTGTATCTCCTGCAGCTCAAGTGCTTATCAACGGGAAACAGCGCACCG
---------------------CTAAGTACTAGTGCCGCGGGAGT 	8
---------------------CTAAGTACTAGTGCCGCGGGAG 	167
---------------------CTAAGTACTAGTGCCGCGGGA 	51
---------------------CTAAGTACTAGTGCCGCGGG 	11
---------------------CTAAGTACTAGTGCCGCGG 	1
----------------------TAAGTACTAGTGCCGCGGGAG 	5
----------------------TAAGTACTAGTGCCGCGGGA 	1
----------------------------------------------------------------CCTGCAGCTCAAGTGCTTAT 	1
-----------------------------------------------------------------CTGCAGCTCAAGTGCTTATCA 	2

Overlaps with: MNEST035071
Overlaps with miRBase pre-miRNAs: api-mir-252a
HuntMi prediction: true miRNA