miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: deep sequencing predictions



Please select library, species and/or miRNA sequence.


selected mature miRNA sequence: TCAGGTACCAAGTGATTTCTGA

selected species: Acyrthosiphon pisum



1 records found  

#specieslibrarymiRNAmiRNA*armmismatchesbulges
1 Acyrthosiphon pisum GSM502519_unique_quant TCAGGTACCAAGTGATTTCTGA AGTAATCTCTGGGTATCTTAAC up 4 0


Secondary structure

AAGACAGAATCTAATACACATTCAGGTACCAAGTGATTTCTGAGTAATTAAACAAACATCAGTAATCTCTGGGTATCTTAACTCTGTGTTAGAATAATTA
---------------------TCAGGTACCAAGTGATTTCTGA 	4823
---------------------TCAGGTACCAAGTGATTTCTG 	1090
---------------------TCAGGTACCAAGTGATTTCT 	217
---------------------TCAGGTACCAAGTGATTTC 	34
----------------------CAGGTACCAAGTGATTTCTGA 	6
-----------------------AGGTACCAAGTGATTTCTGA 	45
-----------------------AGGTACCAAGTGATTTCTG 	13
------------------------------------------------------------AGTAATCTCTGGGTATCTTAACT 	6
------------------------------------------------------------AGTAATCTCTGGGTATCTTAA 	1
------------------------------------------------------------AGTAATCTCTGGGTATCTTA 	1

Overlaps with: MNEST035082
Overlaps with miRBase pre-miRNAs: api-mir-306
HuntMi prediction: true miRNA