miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
917Hordeum vulgareACTCCCTCTGTCCCAAAATAGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_52900.2 cdna:novel chromosome:030312v2:3HS:1323545:1325511:1 gene:MLOC_52900 transcript:MLOC_52900.2214260.04115.53.5
5'     ACTCCCTCTGTCCCAAAATAG        3'
       ||| ||||o|| ||||||||
3' TGACTGATGGAGGCATGGTTTTATATTCAGCA 5'
952Hordeum vulgareACTCCCTCTGTCCCAAAATAGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_32803.1 cdna:novel chromosome:030312v2:5:559812611:559815128:-1 gene:MLOC_32803 transcript:MLOC_32803.121588052.51
5'     ACTCCCTCTGTCCCAAAATAG        3'
       ||||||||||| |||||||||
3' ATGATGAGGGAGACAAGGTTTTATCCACAGAG 5'
1073Hordeum vulgareACTCCCTCTGTCCCAAAATAGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_32803.1 cdna:novel chromosome:030312v2:5:559812611:559815128:-1 gene:MLOC_32803 transcript:MLOC_32803.1215880841
5'     ACTCCCTCTGTCCCAAAATAG        3'
       ||||||||||| |||||||||
3' ATGATGAGGGAGACAAGGTTTTATCCACAGAG 5'
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