miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
274Arabidopsis thalianaAGAGATACGACGGAGATGGAalignmentplotGSM278335-4060AT1G54140.1 cdna:known chromosome:TAIR10:1:20213967:20215223:-1 gene:AT1G54140 transcript:AT1G54140.10420773.5
5'     AGAGATACGACGGAGATGGA         3'
       |||o|o|||||||||| |o
3' ACCGTCTTTGTGCTGCCTCT-CTAACTACTTG 5'
378Arabidopsis thalianaAGAGATACGACGGAGATGGAalignmentplotGSM278370-4061AT5G39471.1 cdna:known chromosome:TAIR10:5:15793965:15795596:-1 gene:AT5G39471 transcript:AT5G39471.114980.04224
5'     AGAGATACGACGGAGATGGA         3'
       |||||||||| ||  ||| |
3' GTACTCTCTATGCTACCAGTAC-TGCCAACTA 5'
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