miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1197Medicago truncatulaATATAGCATCGTGAGCAATCAalignmentplotGSM643817_GDN-4gi|9679875|gb|AL380123.1|AL380123 MtBB50E12R1 MtBB Medicago truncatula cDNA clone MtBB50E12 T7, mRNA sequence23770.0330.4285712.5
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o|||||| |||||||| |
3' TCAATATGTCGTAG-ACTCGTTATTGTTACCG 5'
1199Medicago truncatulaATATAGCATCGTGAGCAATCAalignmentplotGSM643817_GDN-4gi|89245650|gb|DY617437.1|DY617437 AC3425 NOLLY Medicago truncatula cDNA 5', mRNA sequence27690.0230.4285712.5
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o|||||| |||||||| |
3' TCAATATGTCGTAG-ACTCGTTATTGGTTACC 5'
1237Medicago truncatulaATATAGCATCGTGAGCAATCAalignmentplotGSM643817_GDN-4gi|57486979|gb|CX518453.1|CX518453 s13dNF32B09VI077_423739 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence25260.0330.4285712.5
5'     ATATAGCATCGTGAGCAATCA        3'
       |||o|||||| |||||||| |
3' TCAATATGTCGTAG-ACTCGTTATTGTTACCG 5'
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