miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1293Medicago truncatulaATTTGGGACGGAGGGAGTATTalignmentplotGSM643817_GDN-4gi|157980539|gb|EX528811.1|EX528811 MTGland_A046_2007-06-01/MTGlandA046__D01_005_1 Medicago truncatula A17 glandular trichome Me2521020.52
5'     ATTTGGGACGGAGGGAGTATT        3'
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3' ATGTTAAACCCTGCCTCCCTCATTCTCCCCAC 5'
1301Medicago truncatulaATTTGGGACGGAGGGAGTATTalignmentplotGSM643817_GDN-4gi|148765165|gb|ES611859.1|ES611859 MTGland_A012__2007-05-05/MTGlandA012__H01_001_1 Medicago truncatula A17 glandular trichome M0316020.6666671
5'     ATTTGGGACGGAGGGAGTATT        3'
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3' ATGTTAAACCCTGCCTCCCTCATTATGTATTC 5'
1319Medicago truncatulaATTTGGGACGGAGGGAGTATTalignmentplotGSM643817_GDN-4gi|57487645|gb|CX519119.1|CX519119 s13dNF49D08VI074_439458 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence2930.05213.5
5'     ATTTGGGACGGAGGGAGTATT        3'
       ||||| | ||||o|||oo|||
3' GTCTTAAACACAGCCTTCCTTGTAATAATGGA 5'
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