miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
202Arabidopsis thalianaGAGCATTGTGGAGATCAAATalignmentplotGSM278335-4060AT1G65060.2 cdna:known chromosome:TAIR10:1:24167202:24171502:-1 gene:AT1G65060 transcript:AT1G65060.2219510.021472.5
5'     GAGCATTGTGGAGATCAAAT         3'
       o||||||||||| | |||||
3' GTGTTTCGTAACACCTAT-GTTTACTTGCAAA 5'
396Arabidopsis thalianaGAGCATTGTGGAGATCAAATalignmentplotGSM278370-4061AT1G65060.2 cdna:known chromosome:TAIR10:1:24167202:24171502:-1 gene:AT1G65060 transcript:AT1G65060.22195102713.52.5
5'     GAGCATTGTGGAGATCAAAT         3'
       o||||||||||| | |||||
3' GTGTTTCGTAACACCTAT-GTTTACTTGCAAA 5'
422Arabidopsis thalianaGAGCATTGTGGAGATCAAATalignmentplotGSM278370-4061AT1G34550.1 cdna:known chromosome:TAIR10:1:12646696:12652646:-1 gene:AT1G34550 transcript:AT1G34550.1221130.05223
5'     GAGCATTGTGGAGATCAAAT         3'
       ||o|| ||||o|||| ||||
3' GGAACTTGT-ACACTTCTAATTTACCAAATAG 5'
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