miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1192Medicago truncatulaTCCAAAGGGATCGCATTGTTTalignmentplotGSM643817_GDN-4gi|10518586|gb|BE940827.1|BE940827 EST420406 MGHG Medicago truncatula cDNA clone pMGHG-2A7, mRNA sequence2322030.3750
5'     TCCAAAGGGATCGCATTGTTT        3'
       |||||||||||||||||||||
3' CTGTAGGTTTCCCTAGCGTAACAAAGTATGAA 5'
1218Medicago truncatulaTCCAAAGGGATCGCATTGTTTalignmentplotGSM643817_GDN-4gi|151388508|gb|EV258379.1|EV258379 MTYDJ65TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence06500178.50.5
5'     TCCAAAGGGATCGCATTGTTT        3'
       |||||||||||||||||||o|
3' CTGTAGGTTTCCCTAGCGTAACAGAGGTTGAA 5'
1267Medicago truncatulaTCCAAAGGGATCGCATTGTTTalignmentplotGSM643817_GDN-4gi|11609208|gb|BF520525.1|BF520525 EST457996 DSIL Medicago truncatula cDNA clone pDSIL-24I14, mRNA sequence2397030.3750
5'     TCCAAAGGGATCGCATTGTTT        3'
       |||||||||||||||||||||
3' CTGTAGGTTTCCCTAGCGTAACAAAGTATGAA 5'
1326Medicago truncatulaTCCAAAGGGATCGCATTGTTTalignmentplotGSM643817_GDN-4gi|157983377|gb|EX531649.1|EX531649 MTGland_B026_2007-07-02/MTGlandB026_E12_044_1 Medicago truncatula A17 glandular trichome Med238030.3750
5'     TCCAAAGGGATCGCATTGTTT        3'
       |||||||||||||||||||||
3' CTGTAGGTTTCCCTAGCGTAACAAAGTATGAA 5'
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