miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1239Medicago truncatulaTGAGCCAGGATGGCTTGCCGGalignmentplotGSM643817_GDN-4gi|9056606|gb|BE240422.1|BE240422 EST404471 MHRP- Medicago truncatula cDNA clone pMHRP-45I5, mRNA sequence026031313.5
5'    TGAGCC-AGGATGGCTTGCCGG        3'
      |||||| ||||||o |||||oo
3' GCAACTCGGTTCCTACTAAACGGTTTCATTAC 5'
1348Medicago truncatulaTGAGCCAGGATGGCTTGCCGGalignmentplotGSM643817_GDN-4gi|7206473|gb|AW561047.1|AW561047 EST316095 DSIR Medicago truncatula cDNA clone pDSIR-31M23, mRNA sequence0605048483.5
5'    TGAGCC-AGGATGGCTTGCCGG        3'
      |||||| ||||||| ||||| o
3' ATTACTCGGTTCCTACCTAACGGATTCTGGTT 5'
1350Medicago truncatulaTGAGCCAGGATGGCTTGCCGGalignmentplotGSM643817_GDN-4gi|7206473|gb|AW561047.1|AW561047 EST316095 DSIR Medicago truncatula cDNA clone pDSIR-31M23, mRNA sequence2633035353
5'     TGAGCCAGGATG-GCTTGCCGG       3'
       |||||||||||| | |||||oo
3' CATTACTCGGTCCTACTCAAACGGTTTCATTA 5'
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