miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


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species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment

1205Medicago truncatulaTTGGACTGAAGGGAGCTCCCalignmentplotGSM643817_GDN-4gi|14877734|gb|BI270282.1|BI270282 NF008H08FL1F1076 Developing flower Medicago truncatula cDNA clone NF008H08FL 5', mRNA sequenc06100.01102.53
5'     TTGGACTGAAGGGAGCTCCC         3'
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3' ACTTAACCTGACTTCCCAGG-GGGATAATATT 5'
1249Medicago truncatulaTTGGACTGAAGGGAGCTCCCalignmentplotGSM643817_GDN-4gi|83664945|gb|DW015353.1|DW015353 EST1224314 MTY Medicago truncatula cDNA clone MTYA406, mRNA sequence05650993
5'     TTGGACTGAAGGGAGCTCCC         3'
o|||||||||||| | o|||
3' CATTGACCTGACTTCCC-CAGGGGAGACTCAT 5'
1316Medicago truncatulaTTGGACTGAAGGGAGCTCCCalignmentplotGSM643817_GDN-4gi|260520362|gb|GT136198.1|GT136198 METBK88TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence06940.04102.54
5'     TTGGACTGAAGGGAGCTCCC         3'
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3' ACTTAACCTGACTTCCCAGG-GGATAATATTG 5'
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