miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000142
species: Arachis ipaensis
miRNA family: MIR838
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTCTTCTTCTTCTTGTACA

miRNA*
 CACAATGAAGAAAGGAACGAA

mismatches: 4
bulges: 2
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pre-miRNA
 CTTTCTTCGCTCTTTCTCTCTTTTTCTTCTTCTTCTTGTACATTCTCTGTTGTCCATTTACGTCGCAAATGCAACTGCAACTGCAACGAACTCAAAGCGC
ACAATGAAGAAAGGAACGAAGAGAAAGGCTACTCAGAA

dot-bracket secondary structure
........((.((((((((.((.(((((.((((((((((.....((.((..((.......(((.(((..(((....)))..))).))).)).)).))...
)))).))))))))))).)))))))))))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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