miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001429
species: Lotus japonicus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGATCATCATCATCATCTTGG

miRNA*
 AGAATGATGTGATTGTGGTC

mismatches: 4
bulges: 1
View larger
pre-miRNA
 CTCCACAGCTCTAGAATGATGTGATTGTGGTCAGCCCTGACAAAAGGATGGATTCTTGAAATGGCCAGCAGCACAAGTATGTAAAAGAAACTTGCCTCCA
GCTGACATGGATCATCATCATCATCTTGGAGCTGGTTC

dot-bracket secondary structure
.....(((((((((.((((((((((.((.((((((..((.....(((..((.(((((......((.....))............))))).))..))).))
))))))....)).)))).)))))).)))))))))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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