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Species belonging to selected taxon:

Beta vulgaris, Mesembryanthemum crystallinum, Tamarix hispida



ABOUT THIS RECORD

ID: MNEST001547
species: Mesembryanthemum crystallinum
miRNA family: MIRf459
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTTGTATTCTTCCACAGCTT

miRNA*
 GCTGTGGGAAGATACAAATAG

mismatches: 2
bulges: 0
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pre-miRNA
 TATCAATACATATGGTCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCTTCCCTAATTTTTTTATCTTTTGTTTTTCCTCTCTCAGATCCAATT
TTTTCTTTGGTAAATACTTATAATTTATCAAAAAAAAAAAAAGATGGATTTTTGGGAATTGAAAGATGGAAAATTTTAATTTGTGGGTTGCGGTTCAATA
AAGCTGTGGGAAGATACAAATAGGCCCAACAAAAATTCA

dot-bracket secondary structure
............(((.(((.((((((((.((((((((((((.((((((((((....(((.((.((((((((((((((...(((((.....(((((((.((
((((.((((((((((.......)))))))))).)))))).....)))))))..))))).)))))))))))))).))........))).)))))))))).)
))))))))))).)))))))).))).)))...........


SIMILARITIES
miRBase lja-MIR396: 0.000000000000003

PMRD lja-miR396: 0.000000000000003

microPC miR396: 4e-33		UniProt no hits

RFAM MIR396: 0.000000000004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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