ABOUT THIS RECORDspecies: Musa ABB Group
miRNA family: MIR530
source: miRNEST
Taxonomy by NCBI:
Musa ABB Group Musa x paradisiaca Eumusa Musa Musaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCATTTGCACCTGCACCTAA miRNA* AGGTGCAGCGGCAAATGCAAC mismatches: 3 bulges: 0 |
pre-miRNA
GATGGCTGCATTTGCACCTGCACCTAAAGGGGAGCGGGGTGGCCGTGAAGAAAACGAGTTTACATCCACCATGTAGGTGCAGCGGCAAATGCAACCAT
dot-bracket secondary structure
.((((.(((((((((..(((((((((...((.....((((((((((.......))).))...))))).))...)))))))))..))))))))).))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATGGCTGCATTTGCACCTGCACCTAAAGGGGAGCGGGGTGGCCGTGAAGAAAACGAGTTTACATCCACCATGTAGGTGCAGCGGCAAATGCAACCAT
dot-bracket secondary structure
.((((.(((((((((..(((((((((...((.....((((((((((.......))).))...))))).))...)))))))))..))))))))).))))
SIMILARITIES| miRBase osa-MIR530: 0.00002 PMRD osa-miRf10677-akr: 0.00002 microPC miR530: 0.00002 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
