miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001898
species: Phaseolus acutifolius
miRNA family: MIR773
source: miRNEST

Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTGATTTCAGCTTTTGTCCA

miRNA*
 TTGAAGGCTGAAAGAAGG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 TCTGCCGTCCCTTTGATTTCAGCTTTTGTCCAGGCAGAGTTACTATTTTTCACTTTGCATGTGGGCTTTCATCTACCATCCCACAGTGCAGTCCCAGGCT
CATAGCTGGTCTCGTGGGAGATGAAAAAGGATTACTATGCCTTCACTCCTGGTTTAAGCAGTGTAGTATAACTTTTAGCTCCTGCTACTTGCATTGCCAT
ATTGATTGGGGAACATGTTTTGGATCCTCTGCTTCTTGAAGGCTGAAAGAAGGTCATATGA

dot-bracket secondary structure
.........(((((..((((((((((((...((((((((.........((((....((((((((...........)).((((.((((.((((....(((.
....((.(((...(((((((....(((((.(((((..(((....(((...)))....)))..)))))....)))))..))))))).))).))...)))..
))))))))))))))))))..))))..))))))))..)))))))))))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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