miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Phaseolus acutifolius, Phaseolus coccineus, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST001901
species: Phaseolus acutifolius
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTCTTCCTCTTCCTCTTTCT

miRNA*
 GAAGAGGAAGAAGAAGAAGAA

mismatches: 4
bulges: 0
View larger
pre-miRNA
 CTCCTTTTCAGGCTCTTCCTCTTCCTCTTTCTTTTCTTCCTCCTCTTCATCCTCTTCTGGAGGATCTGCAGGCATTGGAGGCGGCAAAGGTGCCTTCATA
GGACTAAATTGAGGGAATATATCTGGTCTTCGTCCAGGCTTAGGCCTTTCCCACTCGATTGGGAAATCGAGAGGGGAACGGCGAGTCATCTTTTCCTCAT
CGGGAGCCATGCGTACGAGGTGCCTCCGAAGGCGTGGAAGTGGAGTGAGAGCGCGAAAGCCAACGATGAAAGGTGATGCAAAGTGAGAAGAAGAAGAAAG
CGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGATGAAGG

dot-bracket secondary structure
.((.(((((....(((((.(((((((((((.((((((((.((.(((((.((.((((((........(((.(((.(((((((.(((..(((((((((((..
.........))))))....))))).))).)).))))))))...(((.(((((.(((((((....)))))))..))))).)))..((((((((....((((
((...((..(((((.((...(((.((((......)))).)))...))...)))))...))...)))))))))))))))))........)))))).))...
.))))).)).)))))))).))))))))))).))))).))))).))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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