ABOUT THIS RECORDspecies: Phaseolus acutifolius
miRNA family: MIRf203
source: miRNEST
Taxonomy by NCBI:
Phaseolus acutifolius Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGAGGTGCAGGTGCAGGTGC miRNA* ATTGCACCAGTACTAGTGTA mismatches: 5 bulges: 1 |
pre-miRNA
GGTGGTTTTGGAGGAGGTGCAGGTGCAGGTGCAGGTGTTGGTATTGGTGGTGGATTCCCTTGAACTCTCATGAACTTTGTTATTCTTAAATATTTTAATG
CTTTATGTATTGCACCAGTACTAGTGTAAC
dot-bracket secondary structure
...............(((((.(((((((.((((((((((((((((...((..(((.....(((....)))........)))..))...)))))..)))))
))...))))))))))).)))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGTGGTTTTGGAGGAGGTGCAGGTGCAGGTGCAGGTGTTGGTATTGGTGGTGGATTCCCTTGAACTCTCATGAACTTTGTTATTCTTAAATATTTTAATG
CTTTATGTATTGCACCAGTACTAGTGTAAC
dot-bracket secondary structure
...............(((((.(((((((.((((((((((((((((...((..(((.....(((....)))........)))..))...)))))..)))))
))...))))))))))).)))))........
SIMILARITIES| miRBase ptc-MIR530a: 0.000002 PMRD ptc-miRf11026-akr: 0.000002 microPC miR1030: 0.00002 | UniProt no hits RFAM MIR530: 0.00003 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
