ABOUT THIS RECORDspecies: Phaseolus coccineus
miRNA family: MIR235
source: miRNEST
Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTGTGTTGTGTTTGTTGT miRNA* AAGGAATACACGAAGTAGGT mismatches: 3 bulges: 1 |
pre-miRNA
CAAGAAAGGAATACACGAAGTAGGTGCATTTGGTGTTGCTGCCTTCTGAAGGGGACCTGCAGAATAAAACCAGTGAATAAGACTTTTATTGTGTTGTGTT
TGTTGTTTGT
dot-bracket secondary structure
((((.((.(((((((((.((((((....((((...((((((..(((((.(((...))).)))))......)))))).))))...)))))).)).))))))
).)).)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CAAGAAAGGAATACACGAAGTAGGTGCATTTGGTGTTGCTGCCTTCTGAAGGGGACCTGCAGAATAAAACCAGTGAATAAGACTTTTATTGTGTTGTGTT
TGTTGTTTGT
dot-bracket secondary structure
((((.((.(((((((((.((((((....((((...((((((..(((((.(((...))).)))))......)))))).))))...)))))).)).))))))
).)).)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
