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Species belonging to selected taxon:

Phaseolus coccineus



ABOUT THIS RECORD

ID: MNEST001921
species: Phaseolus coccineus
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGATCATGTGGCAGTTTCACC

miRNA*
 TGAAGCTGCCAGCATGATCTTA

mismatches: 1
bulges: 1
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pre-miRNA
 AATTATCTAACATCATGCACCACTACCAGTTGAAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTTCAC
CTAGTTGTTGGCCGCATGAACCCTAGTT

dot-bracket secondary structure
............((((((.((((.((.((.(((((((((((.((((((((...(((.(((((......))))).)))...))))))))))))))))))).
)).)).).)))..)))))).........


SIMILARITIES
miRBase gma-MIR167f: 1e-37

PMRD pco-miR167: 2e-33

microPC miR167: 2e-33		UniProt no hits

RFAM MIR167_1: 6e-28		most similar mature miRNAs

Identical with: pco-miR167 from PMRD (MNEST051324)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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