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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST000199
species: Avena sativa
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Avena sativa Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCAGTCCCAAAATAAGTGA

miRNA*
 ATTTATTTTGGAAAGGAGCGA

mismatches: 5
bulges: 0
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pre-miRNA
 TCTCTCCTTCTATAATTACTCCCTCAGTCCCAAAATAAGTGATATGGATTTGTCTAGATTCGGATGTATCTAGCCGGATTTTAGTATATAGATACATATG
AATGTAGACTAACCCAAGTCATTTATTTTGGAAAGGAGCGAGTAACTAATTTGACTTTG

dot-bracket secondary structure
............((.((((((.(((....((((((((((((((.(((.((.(((((.(((((.(((((((((.....((....))...))))))))).))
))).))))).)).))).))))))))))))))....))).)))))).))...........


SIMILARITIES
miRBase far-MIR1122: 0.0005

PMRD osa-miRf11619-akr: 0.00003

microPC miR1439: 0.00003		UniProt no hits

RFAM MIR1122: 0.0000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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