ABOUT THIS RECORDspecies: Pinus banksiana
miRNA family: miR3636
source: miRNEST
Taxonomy by NCBI:
Pinus banksiana Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGTTGGCTTCTTTGATAGT miRNA* TACCAGGTAGCCAACTGCTA mismatches: 4 bulges: 1 |
pre-miRNA
CATGATTTATTTTACCAGGTAGCCAACTGCTATGTTGAAGCATTGTTCTGACTAGAATGCTTGGAAATCGGTTGGCTTCTTTGATAGTTAACGTTGT
dot-bracket secondary structure
......(((..(((.((((.(((((((((.....((.(((((((...........))))))).))...)))))))))..)))).))).)))......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATGATTTATTTTACCAGGTAGCCAACTGCTATGTTGAAGCATTGTTCTGACTAGAATGCTTGGAAATCGGTTGGCTTCTTTGATAGTTAACGTTGT
dot-bracket secondary structure
......(((..(((.((((.(((((((((.....((.(((((((...........))))))).))...)))))))))..)))).))).)))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
