miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Populus nigra



ABOUT THIS RECORD

ID: MNEST002126
species: Populus nigra
miRNA family: MIRf235
source: miRNEST

Taxonomy by NCBI:
Populus nigra Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGTGGTAAGAGCTTGGGACTA

miRNA*
 GGTCTCAGGTTCAAACCTTATG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TAGGTGGTGGCCTAGTGGTAAGAGCTTGGGACTAAGGGGTTTGCTCCCTCTTAGGTCTCAGGTTCAAACCTTATGGCTGCTCATA

dot-bracket secondary structure
...(((((((((....(((..((((((((((((((((((.......))))))).)))))))))))..)))....)))))).))).


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11096-akr: 5e-24

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;