miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002240
species: Prunus armeniaca
miRNA family: MIRf19
source: miRNEST

Taxonomy by NCBI:
Prunus armeniaca Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTTTCTCTGTTTGATTCAG

miRNA*
 CAGAGATTAACCAGAGAGCAAGATG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 CACAATATACAACACACAGAGATTAACCAGAGAGCAAGATGGGGATCAAGCTGGTGGAGATTTTGGATCAGGGAGTGAGAATCGCTGCCAGATCTTATTC
TCATTGCCCTCAGACTAGCCGCATGTACTACCATCCGCCTCCGCCCAGCCATGAAGACCACCACAACCTCCACAACTTTGGCGGCGGCGCCACCACTTCC
GGCGGCGATGCTGCGACGGCCCAGATGCGGTGTTTTGGTCCCAAGAAGGCTGATACCAATGAGTTTATTATTCTTTTCTCTGTTTGATTCAGTATTGTTA
TTGAC

dot-bracket secondary structure
..(((((.((((.((...((.(((((.(((((((.((((..((..(((...(((((((((....(((((.((.(((((...))))).)).)))))...))
))...(((.((.((((((((((.............((((.(((((.((...((.((...........)).))....)).))))).))))...........
.)))))(((((((((..........))))))))).)))))....)).)))...))))).))).....))..))))))))))).))))))).)).))))))
)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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