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Species belonging to selected taxon:

Fagus sylvatica, Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST002309
species: Quercus petraea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Quercus petraea Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCGTCATCTTCT

miRNA*
 AAGAGGCCGGTGTGATGAAG

mismatches: 4
bulges: 1
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pre-miRNA
 AGTCAGCGTCTTCATCATCATCGTCATCTTCTTCATCTGATGAGGACGAGCAAGAGGCCGGTGTGATGAAGTTTGTGAA

dot-bracket secondary structure
.....(((.((((((((.(((((...((((.(((.(((.....))).))).))))...)))))))))))))..)))...


SIMILARITIES
miRBase ath-MIR414: 0.00006

PMRD ath-miR414: 0.00006

microPC no hits		UniProt no hits

RFAM mir-598: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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