miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Raphanus sativus, Raphanus sativus var. oleiformis



ABOUT THIS RECORD

ID: MNEST002391
species: Raphanus sativus
miRNA family: MIRf1281
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTTGGTTGCTGAGAAAG

miRNA*
 TTCTCGGTGACCAGATTCTGATT

mismatches: 1
bulges: 2
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pre-miRNA
 TTCTTTTCATTTCTGTTTGGTTGCTGAGAAAGCGAGGGAAATTCTCTGAAATTTTCTGTTTTCTTTTTCTTTCTCGGTGACCAGATTCTGATTTTTTAC

dot-bracket secondary structure
...........((.((((((((((((((((((.((((((((......(((...)))...)))))))).))))))))))))))))))...))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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