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Species belonging to selected taxon:

Taraxacum kok-saghyz, Taraxacum officinale



ABOUT THIS RECORD

ID: MNEST002688
species: Taraxacum kok-saghyz
miRNA family: miR166g
source: miRNEST

Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTTTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TTTCTTTTGCGGGGAATGTTGTTTGGCTCGAGGTCACTAGAGAGCTTAGATCTCTCTCTCTATCTCTATCTCTATATACATCTATACATATAGATACAGA
TATATGTATCTATCTATGATGTTATAATTATGCTCAATTGGTCAACGGATCCAACATCCATGGTCTTTGTTGATTAATGAGCTTTAGATGAATCTTGATC
GCTGGATCTGGTGTACTCGGACCAGGCTTCATTCCCCCCAATTGTT

dot-bracket secondary structure
......(((.((((((((..((((((.(((((..(((((((...((..((((........(((((.((....((((.(((((.(((...(((((((((..
....))))))))).))))))))))))..)).(((((.((((((((((((.(((.......)))..)))))))))))))))))...)))))......))))
...)).)))))))..))))).))))))..)))))))).))).....


SIMILARITIES
miRBase ptc-MIR166a: 0.0000000002

PMRD ptc-miR166a: 0.0000000002

microPC miR166: 0.0000008		UniProt no hits

RFAM mir-166: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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