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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002798
species: Triticum turgidum subsp. durum
miRNA family: MIR1171
source: miRNEST

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGTGGAGTGGACTGGAGT

miRNA*
 TTTTTACTACTGTACTCTACT

mismatches: 4
bulges: 0
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pre-miRNA
 CACGGCGTGATGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGGAGTGNANTGG

dot-bracket secondary structure
(((...)))..((((.((((((((((((.(((((...(((((...)))))...))))).))))))))).)))...)))).......


SIMILARITIES
miRBase cre-MIR1171: 0.001

PMRD cre-miR1171: 0.001

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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