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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002800
species: Triticum turgidum subsp. durum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCCCATAATAAGTGT

miRNA*
 AGTTATTTTGGGACGGAGGGA

mismatches: 2
bulges: 0
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pre-miRNA
 TATATACTATTCCTCCGTCCCATAATAAGTGTCTCAACTTTGTAGTAACTCTAGTACAAAGTTGTACTAAGCTTGAGACAGTTATTTTGGGACGGAGGGA
GTACTATA

dot-bracket secondary structure
....((((..((((((((((((.(((((.(((((((((((.(((.(((((.........)))))))).))).)))))))).))))).)))))))))))))
))).....


SIMILARITIES
miRBase osa-MIR1862e: 0.00002

PMRD osa-miRf10099-akr: 0.000001

microPC miR1439: 1e-25		UniProt no hits

RFAM MIR1122: 5e-34		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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