ABOUT THIS RECORDspecies: Cenchrus ciliaris
miRNA family: MIRf261
source: miRNEST
Taxonomy by NCBI:
Cenchrus ciliaris Cenchrus Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTAGAAACTCCCCCAAACA miRNA* TTTGGGGGAGCTTCCCCAGCTTT mismatches: 2 bulges: 2 |
pre-miRNA
TTCTAGGCCCTGTTTGGGGGAGCTTCCCCAGCTTTTGCTTCTCCCAGAAGCTCAAAAAGCTAGAAACTCCCCCAAACAGGGACTATG
dot-bracket secondary structure
.....(((((((((((((((((.(((...(((((((((((((...))))))...))))))).))).))))))))))))))).))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTCTAGGCCCTGTTTGGGGGAGCTTCCCCAGCTTTTGCTTCTCCCAGAAGCTCAAAAAGCTAGAAACTCCCCCAAACAGGGACTATG
dot-bracket secondary structure
.....(((((((((((((((((.(((...(((((((((((((...))))))...))))))).))).))))))))))))))).))...
SIMILARITIES| miRBase no hits PMRD osa-miRf11106-akr: 0.00006 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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