miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST002935
species: Centaurea maculosa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCTTCTTCT

miRNA*
 AAGGACGATGGAAAGGATGATG

mismatches: 4
bulges: 1
View larger
pre-miRNA
 GCGGACCTTCATCATCATCATCATCTTCTTCTTCCTCTTACCAAAAAATATGTTTAAAACCAAATGCGGTTGGTATGAGGTCCCTATCTCAGACAGGTCA
TCAGAAGCTTGTTGATAACCGCCGATCTCTTCGGGTGTTCGCCTTATTTGGAGGAAAGAAGGACGATGGAAAGGATGATGGAAAGGCA

dot-bracket secondary structure
.....((((..((((((((.(((((((((((((..((((.(((((.((..((..((.((((......)))).((.((((((....)))))).)).(((.(
((((.......))))).))).((((.....)))).))..))..)).))))))))))))))))).)))))....)))))))).))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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